Gene Dfer_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5467 
Symbol 
ID8229078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6595813 
End bp6596490 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content43% 
IMG OID644933310 
Productprotein of unknown function DUF421 
Protein accessionYP_003089823 
Protein GI255039202 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.244646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCA AAACGATTTT TATAAACGAT CTGGACTGGC AGGGCGCTTT GACGATAGTT 
GTCAAAACGG CAATTATGTT TTTAATGGTT TTGCTTTTTC TAAGACTTTC AGGAAAGAAA
GGCGTGCGGG AGCTTACATT TTTTGAGGTT GCTATTATCA TTTCCCTGGG TTCAGCCGCT
GGCGATCCGA TGCTGATGGA AGATTCGGCT ATTGTGCCTT CCATTATCGT TTTTGCAGTA
ATCATCATTA TTTACCGGCT GCTGACATCC ATTGCTGCGC GAAGCGAAAA GTTTGAAATG
ATATTGGAAG GCGGTCCATT CTACATCATA GAAGATGGGA TGTTTACCCT GGAAGAAGAA
CGGGACAACA ACTTTGCCAA AGACGAGTTT TTTTCTGAAT TAAGAAGCCG TGACGTTGAG
CATATCGGCC AGGTAGAAAC CGCAATCCTT GAAACGAGCG GGATGCTAAG CGTCTATTTT
TATCCCGACG ACCAGTTACG AAAGGGACTT CCAATAAAGC CAAAACCTTA TAACAAAAAA
TCCATAAAAA TTTCGACACC AGGAGACTAC GCCTGCACTA CATGTGCAAA CGTGCAAGAA
CTTTCAGATA GCCAGCAATG CGACAGGTGT GGAGAAAAGG AATGGGTTTT TGAGATATCT
ACTTTACGCG TGGGTTAG
 
Protein sequence
MDFKTIFIND LDWQGALTIV VKTAIMFLMV LLFLRLSGKK GVRELTFFEV AIIISLGSAA 
GDPMLMEDSA IVPSIIVFAV IIIIYRLLTS IAARSEKFEM ILEGGPFYII EDGMFTLEEE
RDNNFAKDEF FSELRSRDVE HIGQVETAIL ETSGMLSVYF YPDDQLRKGL PIKPKPYNKK
SIKISTPGDY ACTTCANVQE LSDSQQCDRC GEKEWVFEIS TLRVG