Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5467 |
Symbol | |
ID | 8229078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6595813 |
End bp | 6596490 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644933310 |
Product | protein of unknown function DUF421 |
Protein accession | YP_003089823 |
Protein GI | 255039202 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.244646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCA AAACGATTTT TATAAACGAT CTGGACTGGC AGGGCGCTTT GACGATAGTT GTCAAAACGG CAATTATGTT TTTAATGGTT TTGCTTTTTC TAAGACTTTC AGGAAAGAAA GGCGTGCGGG AGCTTACATT TTTTGAGGTT GCTATTATCA TTTCCCTGGG TTCAGCCGCT GGCGATCCGA TGCTGATGGA AGATTCGGCT ATTGTGCCTT CCATTATCGT TTTTGCAGTA ATCATCATTA TTTACCGGCT GCTGACATCC ATTGCTGCGC GAAGCGAAAA GTTTGAAATG ATATTGGAAG GCGGTCCATT CTACATCATA GAAGATGGGA TGTTTACCCT GGAAGAAGAA CGGGACAACA ACTTTGCCAA AGACGAGTTT TTTTCTGAAT TAAGAAGCCG TGACGTTGAG CATATCGGCC AGGTAGAAAC CGCAATCCTT GAAACGAGCG GGATGCTAAG CGTCTATTTT TATCCCGACG ACCAGTTACG AAAGGGACTT CCAATAAAGC CAAAACCTTA TAACAAAAAA TCCATAAAAA TTTCGACACC AGGAGACTAC GCCTGCACTA CATGTGCAAA CGTGCAAGAA CTTTCAGATA GCCAGCAATG CGACAGGTGT GGAGAAAAGG AATGGGTTTT TGAGATATCT ACTTTACGCG TGGGTTAG
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Protein sequence | MDFKTIFIND LDWQGALTIV VKTAIMFLMV LLFLRLSGKK GVRELTFFEV AIIISLGSAA GDPMLMEDSA IVPSIIVFAV IIIIYRLLTS IAARSEKFEM ILEGGPFYII EDGMFTLEEE RDNNFAKDEF FSELRSRDVE HIGQVETAIL ETSGMLSVYF YPDDQLRKGL PIKPKPYNKK SIKISTPGDY ACTTCANVQE LSDSQQCDRC GEKEWVFEIS TLRVG
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