Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5369 |
Symbol | |
ID | 8228980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6491907 |
End bp | 6493382 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644933214 |
Product | cobyric acid synthase |
Protein accession | YP_003089727 |
Protein GI | 255039106 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTA AAAAATTACG TCCGATCATG TTTGTCGGCA CGGGCTCGGA TGTGGGCAAA AGCGTGATTG CGGCCGGTTT CTGCCGGATT TTCAGGCAGG ACGGCTACCA GCCTGCGCCT TTCAAGGCCC AGAACATGTC GCTCAACAGC TTCGTCACGC CCGATGGCCT GGAACTGGGC CGCGCACAGG CGGTACAAGC CGAAGCAGCG CAGGTAGCGT GCGAATCGGA TATGAACCCG GTGCTGCTGA AACCGACCAG CGACAAATCT TCGCAGGTGG TATTGAATGG AAAACCGGTG GGTAACCAAA CGGCCTACGA ATATTTCATG GGCAACGACC GCCGCGAGCT GTTTGCGGCC GTGAAGGATG CCTTCGACCG CCTTGCAGCC AAATATTCGC CGATCGTAAT GGAGGGCGCG GGGAGTATTT CCGAACTCAA CCTGAAACAC CGGGATATTA CTAATCTAAG AATGGCGGCC CACGCAGGCG CGGCTACCTA CCTGATCGCC GATATCGACA AAGGCGGGGT GTTTGGCAGC GTGTATGGCA CCATCGCATT GCTCACGCCC GAGGAGCGGG CGTGTATGAA GGGTATCATT ATCAATAAAT TCCGTGGCGA CGGCCGGTTG TTTGAAGACG GCCGGCAAAT GCTGGAAGAA CTCACCGGTT TGCCGGTGGT CGGTGTTTTG CCGTATTTCC GGGATATCCA TATTGAACAG GAAGATTCGG TGTCGTTGGA GCTCAAATAC CGCTCTGCGG TGGAAGGAAA AGTGAATGTA GCTGTGATCC TGCTCAACCG GCTATCCAAT TTTACAGATT TTGACCGGCT GGAAAAGGAT ATGCGCGTGA ATTTGTATTA TACCAATAAC CCCTCCGAAA TAGCAAAGGC GTCGATCGTG ATCGTGCCGG GAAGTAAGAA TACCATCGGG GATATGCTGG CGATTAAGAA TAATGGCGTG GCGAAGGCCA TTTGCGAGGC GCATAAGGCG GGAAATACCG TGATCGGGAT TTGCGGCGGT TACCAAATGC TCGGCGAGCG GATCATGGAC CCGCACCATG TGGAAAGTGA AATTGAAGAA TTGCCAGGCC TCGGACTCCT GCCGGTGGAA ACGATCCTGG AACGCGAAAA GACCACACTC CAAAGCACTT TCCGTTTCAG GCAGGCGGAG CAGGTGTGCA CCGGCTATGA AATTCATATG GGCAGAACAA CGGCATTCCA GCCCGGAGAG GCGGTTGTGA CGATGATGGA CGGGCGGCGG GACGGCTACT TCCGCGACGA CCGTACCTGG GGCACCTACC TCCACGGCAT CCTCGACAAC GACGTGGTGA TCGAGCAAAT GCTCGCGCCC TACACGCAGG AAAAAGCAGT GACGTACGAT TACGCACAAT TTAAGGAACA ACAGTACGAT AAACTCGCTG CATTGCTCCG GGCGCACATC GATATGGATT TGATTTACAA CAGCATAGCA GAATAA
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Protein sequence | MNAKKLRPIM FVGTGSDVGK SVIAAGFCRI FRQDGYQPAP FKAQNMSLNS FVTPDGLELG RAQAVQAEAA QVACESDMNP VLLKPTSDKS SQVVLNGKPV GNQTAYEYFM GNDRRELFAA VKDAFDRLAA KYSPIVMEGA GSISELNLKH RDITNLRMAA HAGAATYLIA DIDKGGVFGS VYGTIALLTP EERACMKGII INKFRGDGRL FEDGRQMLEE LTGLPVVGVL PYFRDIHIEQ EDSVSLELKY RSAVEGKVNV AVILLNRLSN FTDFDRLEKD MRVNLYYTNN PSEIAKASIV IVPGSKNTIG DMLAIKNNGV AKAICEAHKA GNTVIGICGG YQMLGERIMD PHHVESEIEE LPGLGLLPVE TILEREKTTL QSTFRFRQAE QVCTGYEIHM GRTTAFQPGE AVVTMMDGRR DGYFRDDRTW GTYLHGILDN DVVIEQMLAP YTQEKAVTYD YAQFKEQQYD KLAALLRAHI DMDLIYNSIA E
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