| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5305 |
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| Symbol | |
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| ID | 8228916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6403923 |
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| End bp | 6405080 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933150 |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_003089663 |
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| Protein GI | 255039042 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0359696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC TTCAAAAAAT CAACGCCTGG CTGCACCTCT GGCTCGGGCT GGCTTCCGGA
ATCGTGGTGG TTATCGTCGG CTTCACCGGC TGCATCCTCG TTTTCGAATC GGAGCTCGAA
AACCTCACTA TGCAGCATTT GCACGCAGAG AACCCGCAAA ACCGCGAAAT GCTGCCGCCA
TCCGTATTGT GGAAGTCGGT AAAACAGGCG TTGCCGGACA AAGAGATTCA CAGCGTGTGG
TACCATGGTA AAAACCAGAC CGCCCATTTC AGCCTCGATT CCGACTCGCT GGTATACATA
AACCCCTACA CGGCGCAGAT CACGGCGATG GTGGACCATG AAGATTTCTT CCACTTTATC
CTCGATGGCC ACACCAGCCT CTGGATCGAA GGGAAGCTCG GAACAGGCAT CGTGAGCTAC
GCCACCCTGA TTTTCTTCAT CCTCCTCATC ACCGGAATGG TGCTTTGGTG GCCGAAAAAA
TGGACGAAAT CCGAAAAAGA GAAGGCGCTA ACGATCAAAT GGCGGGCGAA ATTCAAGCGT
GTCAACTACG ACCTGCACAA TGTCCTCGGC TTTTATTCGC TTACCATTGC ATTGATATTA
ACTATCACCG GCCTGATCAT GGGTTTCCAG TGGTTCAACA AGAGTTTCTA CTGGCTCACT
TCGGGCGGAC AGGCGCCGGC GCCTTACATG CGCGCATTCT CGGACACTAC GCAAAACCTC
CCGCTCGCCA GTCTGGCCAA TGTAGACGCA GCCTGGCGGA AGGGCATTAC CGAAATCGGT
GTGCTGAACA AGGACGCCAT CATCGTGTCG TTTCCCGAAA AGCCTTCCGA AACGATCGAA
CTTTGTACCG ATATGCACAA CGGCTCGTGG CGCTATGTGT ACCTCGATCA GCACACATTG
GAACAACTTC CCGCAAGCCA GCCGCAGATT TCCGAATTGG ATGTGGCCCA ATGGCTCCGG
CGAACCAACT ATGCGTGGCA TGTGGGCGCA ATCGGTGGAA TGCCGACCAA AATCCTGTTT
TTCATCGCCA GCCTAATCTG TACCAGTCTG CCCATTACCG GCTTCTACAT CTGGTGGGGT
AAAAAAGGCA AGGGCAAAAA GAAAACCGGC AGATTATCAA CCACTTCCCG CATTTCGGTT
TCTGCCGGTA AAGTCTGA
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| Protein sequence | MKILQKINAW LHLWLGLASG IVVVIVGFTG CILVFESELE NLTMQHLHAE NPQNREMLPP
SVLWKSVKQA LPDKEIHSVW YHGKNQTAHF SLDSDSLVYI NPYTAQITAM VDHEDFFHFI
LDGHTSLWIE GKLGTGIVSY ATLIFFILLI TGMVLWWPKK WTKSEKEKAL TIKWRAKFKR
VNYDLHNVLG FYSLTIALIL TITGLIMGFQ WFNKSFYWLT SGGQAPAPYM RAFSDTTQNL
PLASLANVDA AWRKGITEIG VLNKDAIIVS FPEKPSETIE LCTDMHNGSW RYVYLDQHTL
EQLPASQPQI SELDVAQWLR RTNYAWHVGA IGGMPTKILF FIASLICTSL PITGFYIWWG
KKGKGKKKTG RLSTTSRISV SAGKV
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