| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5219 |
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| Symbol | |
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| ID | 8228830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6289123 |
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| End bp | 6290343 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933069 |
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| Product | integrase family protein |
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| Protein accession | YP_003089582 |
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| Protein GI | 255038961 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.759008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAA ACAGTTTCGG GTTAAATTTC TTTTTGAAAA CACCAAGTAC CGAAAACGAA
GATGGCACGA GAGCTATCTA CATGCGCGTG ACCGTGAATC GCCAAGCAAG GGACATCGCT
ACGAGGCGAA TTTGGCACCC ATCCAAATGG AATGTCAGAG CAGGTAGAGC CACAGGAAAC
AAAGAGGAAA CCAAGGAGCT AAATGCCTAC TTGGACTCGT TGACCGCCAA AGTATTCCAG
GCAAAGAAAG CTTTACTTGA TGCCGACAAG GAGTTGACCG CAGACGCGAT CAAAAATTTG
ATGCTTGGCA AGGAGGAAAG CAAAAGAACT ATTCTCAAAA TCTTCCGGGA GCATAACGAT
CAAATCGCAG CCCTAGTGGG TGCCGATTTC GCTCCTGGCA CGCTTGAACG TTACGAGACG
TCCCTCAAAC ACACTCGTGA CTTCATTAAA TGGAATTACC AGGAGGACGA TTTAGACATC
AAGAAGCTGG ACTACGAGTT TATTTCGCAA TTCGAGTTTT GGCTTAAAGC CAAGAAAAAG
ATTAGTCACA ATACCACTAT GAAGTATTTG GCGAACTTTA AAAAAATCGT TCTGCTCTGC
GTCAAGAGAG GCTGGCTTAT GCGTGATCCT TTCTTTGCAT TCAAGTTTAC GAAACGAGAA
GTTGATCGAC AAGCTCTAAC TGAGAGTGAG TTGAAAAAAG TTTGGGAGAA GGATATGGGT
ACAGGCCGTT TGGCTTATGT GAAAGACATC TTCCTATTCT GCTGTTACAC TGGACTCGCA
TATGCTGATG TATATAAGTT AAAGCGAACG GAGATCATCG AGGGAATTGA TGGCGGGAAG
TGGATTACGA CGAAACGACA GAAGACTGAC ACACCTTCCA GAATCCCTCT TCTGCCGATG
GCGCTGGAAA TTATGGAGAA GTATGAAGAT CATCCTCAAT GCGAGAATGA AAATCGTGTA
CTGCCTGTGC TATCTAATCA AAAGATGAAT TCGTACTTGA AGGAGATTGC GGACTTATGT
GGGGTTAAGA AAAATATCAC TTTTCACTTG GCGCGGCACA CGTTCGCTAC AACGGTTACT
CTGACTAATG GGGTACCGAT TGAGAGTGTA TCCAAGATGC TAGGGCATCG GAATATTAAG
ACTACTCAGC AGTATGCGAA AATTGTCGAC AGGAAGATTA GCGATGATAT GGCAAGGTTG
AAGGATATTC TATCTAAGTA A
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| Protein sequence | MLENSFGLNF FLKTPSTENE DGTRAIYMRV TVNRQARDIA TRRIWHPSKW NVRAGRATGN
KEETKELNAY LDSLTAKVFQ AKKALLDADK ELTADAIKNL MLGKEESKRT ILKIFREHND
QIAALVGADF APGTLERYET SLKHTRDFIK WNYQEDDLDI KKLDYEFISQ FEFWLKAKKK
ISHNTTMKYL ANFKKIVLLC VKRGWLMRDP FFAFKFTKRE VDRQALTESE LKKVWEKDMG
TGRLAYVKDI FLFCCYTGLA YADVYKLKRT EIIEGIDGGK WITTKRQKTD TPSRIPLLPM
ALEIMEKYED HPQCENENRV LPVLSNQKMN SYLKEIADLC GVKKNITFHL ARHTFATTVT
LTNGVPIESV SKMLGHRNIK TTQQYAKIVD RKISDDMARL KDILSK
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