Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5194 |
Symbol | |
ID | 8228804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6262940 |
End bp | 6263575 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644933043 |
Product | Peroxidase |
Protein accession | YP_003089557 |
Protein GI | 255038936 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.600371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.125257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTC GATTAGGAGA TATCGCACCG GACTTTGAAG CAAATACCAC GCAGGGACCC ATTAAATTCC ACGAATGGCT GGGAGATAGC TGGGGATTGT TGTTCTCTCA CCCGGCCGAC TTTACGCCTG TTTGTACAAC TGAATTGGGT AAAACAGCGC TGCTGAAAGG TGAATTTGAA AAACGCAATG TGAAAGTGCT CGCGGTGAGC GTCGACGACC TGGATTCGCA TAACCGCTGG ATACCGGATA TCAACGAGGT AAACGATACG GAAGTGAACT TCCCGATCAT CGCCGACGAA GGCCGCCAGG TAGCACAGCT ATATGATATG ATCCACCCGA ACGCCAGCGA AAAAGCGACG GTACGCTCGG TATTCGTGAT CGGCCCGGAC AAGAAGATCA AGCTTACCCT TACTTATCCT GCATCGACAG GCCGTAATTT CAACGAAATC CTCCGCGTGG TGGATTCCTT GCAGCTGACG GCAAACTACT CGGTAGCCAC ACCGGCCGAC TGGAAAGACG GCGAGGATGT GATCGTGGTG CCGGCGGTAA GCACCGAAGA CGCCCAGAAG AAGTTCACCA AGGGTTTGAA TATCGTGAAG CCGTATTTGC GCTACACACC GCAACCGAAC AAGTAA
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Protein sequence | MSLRLGDIAP DFEANTTQGP IKFHEWLGDS WGLLFSHPAD FTPVCTTELG KTALLKGEFE KRNVKVLAVS VDDLDSHNRW IPDINEVNDT EVNFPIIADE GRQVAQLYDM IHPNASEKAT VRSVFVIGPD KKIKLTLTYP ASTGRNFNEI LRVVDSLQLT ANYSVATPAD WKDGEDVIVV PAVSTEDAQK KFTKGLNIVK PYLRYTPQPN K
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