| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5127 |
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| Symbol | |
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| ID | 8228734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6189118 |
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| End bp | 6192150 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932975 |
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| Product | amidohydrolase |
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| Protein accession | YP_003089492 |
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| Protein GI | 255038871 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.326983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA AATTATCAAC GATATTAGGC TGCACAACCC TGGCGATTTA CTGCCATGCG
CAGGAAACCT TCCCCCGCAA CGGTGCCTAC GATGAAAGAA CCGGCCGGTA CGCTTTCACC
AATGCCACGA TCGTAGCCGA CCCGAAAACC ACGATAGAAA ACGCAACCAT GCTGATCGAA
AACGGGGTGA TCCGTGAAAC GGGCAAGCAG GTGAAAATCC CCGCCGGAAC GGTTGCCATT
GATTTGAAAG GCAAATTTAT CTACGCTTCG CTCATCGAAC TGGATTCCGA TTATGGAATG
CCGGAGGTGA AAAGAGCCCA AGGCGGAGGC GGGCGGCAAA CCCCTCAGCT GGAATCGAAC
AAGAAAGGCG CCTTTGGCTG GAACCAGGCC ATCCAGCCCG AAACGGATGC GAGTATCCTC
TTTACACCCG ATGATAGAAA GGCAGGCGAC CTGCGTAAAA TCGGCTTCGG CACGGTGCTG
GTGCATGCGC ACGACGGTAT CGTGCGCGGG AACGGCGCAC TCGTAACCCT CACCGACGAG
CCCGCCAACA AGGCCATGCT GAACAGCCGG GCATCGGCCC ACTTTTCGTT CAGCAAGGGA
AGTTCCTCGC AAACCTACCC GTCGTCGGGT ATGGGCGTAG TGGCGCTGCT GCGGCAGAAC
TATTACGATG GTGACTGGTA CGCGAAAGGG GGAGATAATA AGGAAACCAA CCTGTCGCTG
GAAGCATTCA ACCGGATTAA AGGATTGCCT TCTTTTTTCG AAGCGAATGA TAAATACAGC
GTTTTGCGGG CCGATAAAAT CGGTGATGAA TTTGGCATTC AATACATTAT CCGCGGAGGA
GGCGATGAAT ATCAGCGCAT CCGGGAAATC CGCGAGAGCA AGGCTACATT GCTACTGCCG
CTCGTTTTCC CGGACGCCTA CGACGTTTCA GACCCGTGGG ACGCGGAGAT GGTGACCATG
AGCCAGCTCA AACACTGGGA ACTTGCGCCG GCCAATGCGT CGGAAGTGGC GAAGGCCGAT
ATTCCGTTCG CTTTCACGGC CTCGGGCCTC CGAAACAAAG CGGATTTCTG GAAAAACCTG
CGCACGGCCA TTGAATACGG CTTGCCGAAG GAAAAGGCAT TGGCGGCATT GACCACCCTT
CCGGCCTCGC TCATCAAGGC GGACAAACAG ATCGGCAGCC TCAAACCCGG CATGCTGGCC
AATTTCATCA TCACATCCGG CGACCTGTTT TCGAAGGATA ATGTGATTTA TGAAAACTGG
GTCCAAGGCA AGAAATTCGT TCTCACGGCA CTGGATGCGC CCGATATCAG AGGCAGCTAC
TCGTTATCGC TGAATAACCA GCCTGCCGGA AAATTGCAGA TCACAGGCTC GCCGGAAAAG
CCGGAGTACA AAATCGTTAT CAGTGACTCG GTGCAAATCA CGCCCAAAGC GATACTTTCC
AACGCATTAC TCACCTTGAC CTACCAGCAG GACAAAAAAA CTGGCGGGAC GACCCGTCTG
ACGGGCTGGC TGAGCGGCAG CGGGTTTGCC GGGGAAGGCG TGCTGCCCAA TGGAACCGTG
ATCCCATGGA GCGCGGCACT CACCGAAAAG TACCGGGCCA TAGCAGCAGC CGATACGACC
AAACCTAAAA CCCGGGAAAA TGGCCCGATC GTTTATCCAT TCGTGGGCTA TGGCAATGAA
ACATTGCCTG CCCGGGAAAC CATCCTGATT AAAAACGCGA CGATCTGGAC AAACGAAAAG
GAAGGTATTC TTCAAAATGC GGATGTGATC GTTCAAAACG GGACGATTAC CAAGGTAGGG
AAAGGGTTGG CTGCTCCCTC CGGCGCCAGG ACGGTCGATG GAACGGGTAA GCACCTGACC
AGCGGAATCA TCGACGAGCA TTCGCATATC GCACTTTTCA GTATCAATGA AGGCGGCCAG
ACGAGCTCGG CGGAAGTGCG TATGAGCGAT GTGATCAATC CCGACGATAT CAATATTTAT
CGCCAGCTGG CAGGCGGCGT TACGGCCTCG CATTTGCTCC ACGGCTCGGC GAACTCCATT
GGTGGCCAGA GCGCTATGAT CAAGCTGAAA TGGGGTGCCA GCCAGTCGGA AATGCTGATG
CCTGGCGTGA AAACGATCAA GTTTGCATTG GGCGAGAACG TGAAGCAGTC GAACTGGGGC
GATGTGCAGC GCGTGCGCTT CCCGCAGACG CGCATGGGCG TGGAGCAGGT TTATTTCGAC
CATTTTCTGC GTGCGAAAGA ATACGCGGCA AGCTGGAAAA GCTACAATGC GAATGCTAAA
AAGCAGAATG CGACCGCGCC TCGCCGCGAT ATCGAGCTCG ATGCGCTGGC TGAGATCCTG
GGCAACGAGC GGTTCATCAC CTGCCACTCT TATGTGCAGT CGGAAATTAA CATGCTGATG
CACGTGGCGG ATTCCCTGAA ATTCAAAATC AATACATTTA CGCACATCCT GGAAGGCTAC
AAGCTGGCCG ATGGCATGCA GAAACGCGGC ATCGGCGGCT CCACGTTCGC CGACTGGTGG
GCATATAAAA TGGAAGTGAA AGAGGCGATC CCGTATAATG CCGCACTCAT GTATCACGAA
GGTGTTACCG TGGCCATCAA CTCCGACGAC GCCGAAATGG CCCGCCGGCT CAACCAGGAA
GCAGCCAAGA CCGTCGAATA TGGCGGCGTG CCGGAAGAGG AAGCGTGGAA AATGGTGACA
CTCAATCCCG CCAAACTGCT CCACGTCGAC GATCGCATGG GCAGCGTGAA AGTGGGTAAA
GATGCAGACC TGGTGCTTTG GAATGCCAGC CCGCTGTCGG TGTATGCAAG GCCTGAATTC
ACCATGATCG AAGGCACCAT TTATTTTGAC CGTAAGAAGG ATGAGGAGAA ACAGAAACTG
ATCGCCACCG AACGCGAAAG GCTGATCCAG AAAATGCTGG GCGAAAAGGC CGAAGGCAAG
CCGACGCAAA AGCCGGAAGC GACCAAGCCC CACATGTGGC ATTGCGAGGA TGTTGTCGGC
ATCCACGCGG AACACGCGGA GGTGGGTAAG TAA
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| Protein sequence | MFKKLSTILG CTTLAIYCHA QETFPRNGAY DERTGRYAFT NATIVADPKT TIENATMLIE
NGVIRETGKQ VKIPAGTVAI DLKGKFIYAS LIELDSDYGM PEVKRAQGGG GRQTPQLESN
KKGAFGWNQA IQPETDASIL FTPDDRKAGD LRKIGFGTVL VHAHDGIVRG NGALVTLTDE
PANKAMLNSR ASAHFSFSKG SSSQTYPSSG MGVVALLRQN YYDGDWYAKG GDNKETNLSL
EAFNRIKGLP SFFEANDKYS VLRADKIGDE FGIQYIIRGG GDEYQRIREI RESKATLLLP
LVFPDAYDVS DPWDAEMVTM SQLKHWELAP ANASEVAKAD IPFAFTASGL RNKADFWKNL
RTAIEYGLPK EKALAALTTL PASLIKADKQ IGSLKPGMLA NFIITSGDLF SKDNVIYENW
VQGKKFVLTA LDAPDIRGSY SLSLNNQPAG KLQITGSPEK PEYKIVISDS VQITPKAILS
NALLTLTYQQ DKKTGGTTRL TGWLSGSGFA GEGVLPNGTV IPWSAALTEK YRAIAAADTT
KPKTRENGPI VYPFVGYGNE TLPARETILI KNATIWTNEK EGILQNADVI VQNGTITKVG
KGLAAPSGAR TVDGTGKHLT SGIIDEHSHI ALFSINEGGQ TSSAEVRMSD VINPDDINIY
RQLAGGVTAS HLLHGSANSI GGQSAMIKLK WGASQSEMLM PGVKTIKFAL GENVKQSNWG
DVQRVRFPQT RMGVEQVYFD HFLRAKEYAA SWKSYNANAK KQNATAPRRD IELDALAEIL
GNERFITCHS YVQSEINMLM HVADSLKFKI NTFTHILEGY KLADGMQKRG IGGSTFADWW
AYKMEVKEAI PYNAALMYHE GVTVAINSDD AEMARRLNQE AAKTVEYGGV PEEEAWKMVT
LNPAKLLHVD DRMGSVKVGK DADLVLWNAS PLSVYARPEF TMIEGTIYFD RKKDEEKQKL
IATERERLIQ KMLGEKAEGK PTQKPEATKP HMWHCEDVVG IHAEHAEVGK
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