Gene Dfer_5022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5022 
Symbol 
ID8228628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6074242 
End bp6074778 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content48% 
IMG OID644932870 
ProductATP synthase F1, delta subunit 
Protein accessionYP_003089387 
Protein GI255038766 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.557058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA GTATTGTAGC ATCCAGATAT GCAAAATCGC TGATCGAGCT GGCGAAAGAA 
CAGAACGTTC TGGACACCGT GTATCAGGAT ATGCTGCTGT TCAAAGACAC AGCAGACAAG
AACCGCGGCC TGATGCTTGC ATTGAAAAGC CCGGTGGTGC GTCACGAGAA GAAATCAGGC
ATTCTGAAAG GCCTTTTCAA AGAGCGTGTA AGCCCCGTAT CATTCGCGAT CTTCGATATT
ATCACGAAGA AAAACCGGGA GGCGATCCTG GACGAAATCG CGATCGAATT TATCAAAGCC
TATAACAGCT TCAAGGGAAT CGAAAGAGCG ACGGTGGTAA CCCCTACCCC GCTGACCGAC
GAACTTCGCA AGCAATTCAG CGATATTGTT GCCAAAGCAA CCGGAAAAAC GGTAGAACTG
GCCGAAAAAG TAGACAATGC TTTGATCGGC GGATATGTGT TGACAGTGGG CGACCGCCAG
ATCGACGCAT CGCTGCGCAG CCGTTTGAAC GAACTTAAAT TACAGTTAGT AAACTGA
 
Protein sequence
MSVSIVASRY AKSLIELAKE QNVLDTVYQD MLLFKDTADK NRGLMLALKS PVVRHEKKSG 
ILKGLFKERV SPVSFAIFDI ITKKNREAIL DEIAIEFIKA YNSFKGIERA TVVTPTPLTD
ELRKQFSDIV AKATGKTVEL AEKVDNALIG GYVLTVGDRQ IDASLRSRLN ELKLQLVN