Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4948 |
Symbol | |
ID | 8228554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5981140 |
End bp | 5984691 |
Gene Length | 3552 bp |
Protein Length | 1183 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644932796 |
Product | ASPIC/UnbV domain protein |
Protein accession | YP_003089313 |
Protein GI | 255038692 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.571754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.80828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGA AACGCTTACT GCCCGTTTTA ATAGGGGTTG TCCTGCTGGT ATCCTGCAAA AAAGAGCTGA AAACCTTCAC CGAATTGCCG GCAGGCGAAA CGGGTATCCA TTTCTCCAAT CGCATCGCGG AAAACGATAC GATGAATATC CTGGCATTTG AATATGTGTA CAATGGCGGC GGGGTTGCGC TGGGAGATTT CAACAATGAT AGTCTGCCAG ACGTGTATTT TACCGGTAAT ACTACGCCCA ACAAGCTGTA TCTCAACAAG GGAGATTTTA AGTTTGAAGA CGTTACGGAC CAGGCGGGCG TGGCACCAAA AGACAAATGG TCGACTGGCG TGGCTCTGGT GGATATTAAT CACGACAATC TGCTCGATAT TTACGTGTGT GCGTCCGTGC GGAAGTCGGC GCAGCAGCGG GAAAATCTTT TGTATGTAAA CCAGGGCCTG AATGCCGATA AAGTGCCGGT TTTCAAGGAA ATGGCAAAGG AATACGGCAT TGCCGACACC ACCCACACCA CGAATGCGGC TTTCTTCGAT TACGACAACG ACGGCGATCT GGACCTGTTC CTGATCGTGA ACGAGATGGA CGACAACAAT TTCCCTAATA AGTATCACAA AAAAATCGTC GACGGATCGT CGCGGCGCAC CGATCGCCTT TATCGCAATG ATTGGGACGC GAAGCTTAAC CATCCCGTGT TCACCAACGT GTCCCGTGAG GCGGGGGTTC TCATTGAAGG TTACAGCCTG GGAATCAACG TGACGGACGT GAATCAGGAT GGCTGGAAGG ACGTGTACAT CACGAACGAC TACCTTACGA ACGACCTGCT TTACATAAAC AATGGCAACG GGACATTCAC GGATCGCGCG CCGACCTATT TCAAGCACAC TTCGCATTCG GCGATGGGTA ACGACGTGGC CGATCTGAAC AATGACGGCC TGATGGACGT CGTGGCCGTA GATATGATGC CCGCCACTAA CCGCCGCAAA AAAATGATGA CGCCGGCTAA CAGTTATGTG ACTTATCAGA ACAACGAACT GTTCGGTTAT CAGTATCAGG TGGCGCGGAA TACGCTGCAA CTAAACATGG GAAGTGCCGT TCCGGAGGAT AAATCGCCGG TTTTCAGTGA AATCGGATTG CTGAGCGGGG TAGCGGAAAC GGATTGGAGC TGGACACCGA TGGTCACTGA TTTCGACAAC GACGGCCTTC GGGATATGAT CATCACCAAC GGCTTCCCGA GGGATATTAC CGATCTTGAC TTCATCGCTT ACCGCAACGA AGTGTCAAGC ATCATGGCCC CCATGATGAT GCTCGACTAC ATTCCGAGCG TCAGGATCAC GAATTTTGCA TTTAAGAACA AAGGCGATCT GACCTTCGAA GATGTGAGTA AAGATTGGGG CATCGAAACG CCCGGCTTTT CGAACGGCGC AGCTTACGCG GACCTCGATA ACGACGGTGA CCTTGATTAC ATCGTCAATA ATATCAACGA TTCGGCGATG GTTTATCGCA ACAACAGCAT TCAACTCAGG CCTCAGGAAA GCAATTATCT GCGGATTGCG TTTAAGGGTG AGCGTTACAA TGGCGCTGGG ATAGGGGCCA TTGCGGAAAT TACATTAGCG AACGGTAAGA AACAGGTAGC CGAAAACTCG CCTTACCGTG GGTATCTTTC CACGGTAGAG CCTGTTCTGC ATTTCGGTCT GGGCAAAGAA AGCGCTGTGC AGGAAGTGAA AGTGACGTGG CCTGGTGGTA AAACGCAGGT TTTGAAAAAT GTGAAAGGAA ATCAAACGCT GGTAGTTCGT GAAAAAGACG CCGGGGCTGC GCCTGGGGAT CGCAAAACGC CGGCTATTCC GTTATTTAAG GACATTACCA GCGAATTGAA TGTGTCGTAC AAGCATTCAG AAATGGACGT GATCGACTTC AATGTGCAGA AATTATTGCC TCATAAAATG TCGCAATACG GTCCGGCACT TGCTGCGGGT GATGTGAATG GCGATGGGTT GGAAGATGTA TTTGTAGGCG GGGCGTACCA GAACAAAGGG CGTTTTCTCC TCCAACAGCC GGATGGTAAA TTTACCGTGG CCGACCTCCT TCCGGGCGCC GACGGGCTTG AAAAGGCATC CGAGGATATG GGTGTGTTGC TGTTCGATGC GGATCTGGAC AAAGACCTTG ACCTCTACAT TGTCAGTGGA AGTTACGAAA TACAGGAAGG GTCCGAAGCA TTGCGGAATG TATTGTATCT GAATGACGGA AAGGGTCAGT TTAAGCAGGA TACCGCAGCA TTGCCCGCGT TTCTGGTGAA TGGCTCGTGC GTGAAAGCCG TCGATTTCGA TCGCGACGGC GACCTGGATT TGTTCGTCGG AGGCCGGGTG GAGTCGGGGA AGTATCCCAA ACCGGTTTCG AGTTACATTC TGCGTAACGA TTCAAAAGGC GATCTTGTGC GATTCTCAAA TGTCACGCGG GCGGTAGCGC CTGATTTGGC TGAAATCGGC CTCGTTTGCG ATGCGCTCTG GACAGACTAT GACAACGACG GCTGGGCCGA CCTCCTGCTG GCAGGTGAAT GGATGGCGCC GACATTCCTG AAAAACGAAA AGGGTAAATT CAAAAAGGTA GCCACGGGCC TGGAAGCCAA AAAAGGCTGG TGGGGCAGCC TCGCAGCGGG CGATTTCGAC AACGACGGCG ATATGGATTA TATTGGCGGA AACCTGGGCG TGAACACGCT GAGCCGGGCT TCGGAAAGTC GCCCCGTGAG CGTGTATGCG AAAGATTTCA ACAATGACGG CTATTTCGAT GCGATACCGA CCATTTTTTA CCGGGCGCAG GATGATAGCT ACAAGGAGTT TCCGTATAAC ACCCGCGACG ACATGGGCAA GCAGGTAATA CAAGTGCGCC AGCGCTTCCA GGAATATGGA AAATTCGCGG AAACGACGCT GACGCAAATT CTGAAACCGG AGGAGCTGAA AGATGCCTTG CATTTGTCGG CCACGTGGAT GAAAAGCAGC TACATTGAAA ACCTTGGCAA CAATCAATTC ACGATTCGCG AATTACCCGT TCAGGCGCAA TTCGCCCCCC TTTTCGGGAT GATTGCCGAT GATTTTGATC AGGATGGTAA CCTCGATCTC ATGCTTTCGG GCAACGATTA TGGCTCAGAA GTGTCGGTAG GGCGGTACGA TGCGATGTAC GGCCTGGTGC TGAAAGGCGA CGGCAAGGGT AATTTCCATC CGCTGAGTAT TTTAGAGAGT GGATATATGG CTCCCGGTAA CATGAAAGCG CTCGTTCGCC TCGCATCAGC CAATGGTAAA TACCTTTCCG CGACCTCCCA AAACCGGGAC ATGATTCGTT TTCACGAAGC GCAAAAAGCC GTTCGAAAGG TGGATTTAGC CGATGGGGAA ACGTCTGTCA TTTTACATTT TAAAAATGGC AAGTCCAGAA AGGAAGAGCC GGGTTACGGT TCATCGTTTC TGTCTCAATC GAGCCACACG TTGTTTGTGC CGGAATATGT TTCTTCCATA ACCATTATCA ACTCCAAAGG CGGGAAAAGA CAGGCGAAGT AA
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Protein sequence | MSAKRLLPVL IGVVLLVSCK KELKTFTELP AGETGIHFSN RIAENDTMNI LAFEYVYNGG GVALGDFNND SLPDVYFTGN TTPNKLYLNK GDFKFEDVTD QAGVAPKDKW STGVALVDIN HDNLLDIYVC ASVRKSAQQR ENLLYVNQGL NADKVPVFKE MAKEYGIADT THTTNAAFFD YDNDGDLDLF LIVNEMDDNN FPNKYHKKIV DGSSRRTDRL YRNDWDAKLN HPVFTNVSRE AGVLIEGYSL GINVTDVNQD GWKDVYITND YLTNDLLYIN NGNGTFTDRA PTYFKHTSHS AMGNDVADLN NDGLMDVVAV DMMPATNRRK KMMTPANSYV TYQNNELFGY QYQVARNTLQ LNMGSAVPED KSPVFSEIGL LSGVAETDWS WTPMVTDFDN DGLRDMIITN GFPRDITDLD FIAYRNEVSS IMAPMMMLDY IPSVRITNFA FKNKGDLTFE DVSKDWGIET PGFSNGAAYA DLDNDGDLDY IVNNINDSAM VYRNNSIQLR PQESNYLRIA FKGERYNGAG IGAIAEITLA NGKKQVAENS PYRGYLSTVE PVLHFGLGKE SAVQEVKVTW PGGKTQVLKN VKGNQTLVVR EKDAGAAPGD RKTPAIPLFK DITSELNVSY KHSEMDVIDF NVQKLLPHKM SQYGPALAAG DVNGDGLEDV FVGGAYQNKG RFLLQQPDGK FTVADLLPGA DGLEKASEDM GVLLFDADLD KDLDLYIVSG SYEIQEGSEA LRNVLYLNDG KGQFKQDTAA LPAFLVNGSC VKAVDFDRDG DLDLFVGGRV ESGKYPKPVS SYILRNDSKG DLVRFSNVTR AVAPDLAEIG LVCDALWTDY DNDGWADLLL AGEWMAPTFL KNEKGKFKKV ATGLEAKKGW WGSLAAGDFD NDGDMDYIGG NLGVNTLSRA SESRPVSVYA KDFNNDGYFD AIPTIFYRAQ DDSYKEFPYN TRDDMGKQVI QVRQRFQEYG KFAETTLTQI LKPEELKDAL HLSATWMKSS YIENLGNNQF TIRELPVQAQ FAPLFGMIAD DFDQDGNLDL MLSGNDYGSE VSVGRYDAMY GLVLKGDGKG NFHPLSILES GYMAPGNMKA LVRLASANGK YLSATSQNRD MIRFHEAQKA VRKVDLADGE TSVILHFKNG KSRKEEPGYG SSFLSQSSHT LFVPEYVSSI TIINSKGGKR QAK
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