Gene Dfer_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4929 
Symbol 
ID8228535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp5954116 
End bp5954727 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID644932777 
Productdephospho-CoA kinase 
Protein accessionYP_003089294 
Protein GI255038673 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0237] Dephospho-CoA kinase 
TIGRFAM ID[TIGR00152] dephospho-CoA kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.405896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.626213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC CACTTCTGAT AGGTATAACG GGTGGCATCG GTTCCGGCAA AAGCATGGTT 
TGCAGACTGT TCGAATGTCT GGATATTCCG GTTTACTACG CCGATAGCCG GGCCAAATGG 
CTCACCAATT ATGATCCGGA AATCCGCGAA AAGGTGACCC ATCTGCTGGG GCCGGATGCT 
TACGACGACG AGGGCCGCTA CGACACGCGT TTTGTAGCGT CACGCGTTTT CGGCAACGAG 
CCCCTTTTGA AACAATTGAA TACCATCATT CACCCGGTGG TACTCCGCGA TACGAAAGAA 
TGGCTCATGG CCAATGCGGG GTTGCCTTAT GTAGCGAAAG AGGCGGCCAT TATGGGCAAG 
GCGGGGCAGG CCAATTCGGT GGACTATGTG GTGATGGTGG ACGCTCCGGT GGAACTGCGC 
ATCCAGCGCA TATTGCAGCG CGACAAGCGT TCGGAGCAGG AGATCAGGGC AATTATCGAG 
CGGCAGATCT CCGATGAATC GCGAAGAGGA ATTTCCGATT TTATCGTGCA AAACGACAAC 
GATTCCGAGC TCATTCCCCA GGTGCTCCGG TTACACGAAA TCTTCAAAAA AGGGCGGACT 
TCCGTTTCCT AA
 
Protein sequence
MELPLLIGIT GGIGSGKSMV CRLFECLDIP VYYADSRAKW LTNYDPEIRE KVTHLLGPDA 
YDDEGRYDTR FVASRVFGNE PLLKQLNTII HPVVLRDTKE WLMANAGLPY VAKEAAIMGK 
AGQANSVDYV VMVDAPVELR IQRILQRDKR SEQEIRAIIE RQISDESRRG ISDFIVQNDN 
DSELIPQVLR LHEIFKKGRT SVS