Gene Dfer_4884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4884 
Symbol 
ID8228490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5907929 
End bp5908240 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID644932733 
Productribosomal protein L21 
Protein accessionYP_003089250 
Protein GI255038629 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.125132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.112158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAA TCGTAGAAAT CGCAGGTCAG CAATTTAAAG TTGAAAAGGG TCGCGAAATC 
TTCACGCATA GGCTTGAAGG TGACGTGAAC GCTGCACTTG TATTTGACAA AGTCCTACTC
GTTGACAACG GAGGCACAGT ACAGGTAGGT CTTCCGACAG TAGCAGGCGC TTCTGTAAAA
GCAACTGTTC TCGAACACCT GAAAGGTGAA AAAGTGATCG TTTTCAAAAA GAAACGCCGC
AAAGGATACC GTGTTAAAAA CGGTCACCGT CAGTATCTGA CCAAAATCAG CATCGACGAA
ATCGTTGCCT AA
 
Protein sequence
MYAIVEIAGQ QFKVEKGREI FTHRLEGDVN AALVFDKVLL VDNGGTVQVG LPTVAGASVK 
ATVLEHLKGE KVIVFKKKRR KGYRVKNGHR QYLTKISIDE IVA