Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4872 |
Symbol | |
ID | 8228478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5894928 |
End bp | 5895869 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644932721 |
Product | DNA uptake protein and related DNA-binding protein-like protein |
Protein accession | YP_003089238 |
Protein GI | 255038617 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.669623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGTA AAATTTTAAA TGCACTACAG GATTTTTTCG GCATATCCCG AAAAGAAGCC CGGGGCGCGC TGGTAATGAT GCTATGCTGC GCCGTGGTCA TCTGGACGCC CTTTGTATTT CGCCGCTGGG TGCTGCCCCT CGTTCCGGCC GGCGTTCCAC CGGAGCGAAA AGTGCTGGAC AGCATTGCCG TGCTACTCGA AAAGCAGCAG GCGGCCGGTT ACCGTAGGGG AAAACGGGCT GGTGGTGAGC CGCGGCCATT GCCTCCGAAG CATATCGTGC TCGCCCGGTT CGATCCCAAC GAAGCATCCG AGGAGGTGTT GATGGGTGTC GGCATTCCGG CGTTCATCGC GCGGCGCATC GTCAAGTTCA GGATCAAGGG CGGGCGATTC GCGCGGAAGG AGGATTTGAT GAAAATATAC GATTTCCCGC CGGAGCTCTA TGCCCGTTTG GAAAGGTTTA TAGTCATTGA AAATGCTCCC GCGGCGGTGC AAAGCGGCAT TTCGGAGACG CGCACCTATG CCAGGCAGCA GGTTAAAGTT AATATTGCAC CGTTCGACAT TAACCAATGC GATACCACGG CGCTCATTCG GCTGAAAGGC ATTGGAAGCA AGCTGGCGCA GCGGATACTG AAATTCCGCG ACGGCCTGGG AGGGTTCCAC TCGGCAGACC AGTTTGCCGA GGTCTACGGT CTGGATTCGC TCGCGTTGTC GGAGTTGAAG CGCTATGCGA AAGTGAACAG CGACGTGCGA AAGGTGCCCA TTAACACAGC CACCGCCGAG GAAATGGGCA GGCATCCGTA TCTACGAAAC CGGAAGCAGG TGCAGGTGTT GCTCAATTAT CGCGCGCAGC ACGGGCCTTT CAGGTCGCTG GACGATCTGC GTGCGGTGAA GGTGCTCGAC GAAGCCACGA TACAAAAAAT AGGGCCATAC CTGTCTTTCT GA
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Protein sequence | MYRKILNALQ DFFGISRKEA RGALVMMLCC AVVIWTPFVF RRWVLPLVPA GVPPERKVLD SIAVLLEKQQ AAGYRRGKRA GGEPRPLPPK HIVLARFDPN EASEEVLMGV GIPAFIARRI VKFRIKGGRF ARKEDLMKIY DFPPELYARL ERFIVIENAP AAVQSGISET RTYARQQVKV NIAPFDINQC DTTALIRLKG IGSKLAQRIL KFRDGLGGFH SADQFAEVYG LDSLALSELK RYAKVNSDVR KVPINTATAE EMGRHPYLRN RKQVQVLLNY RAQHGPFRSL DDLRAVKVLD EATIQKIGPY LSF
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