| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4856 |
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| Symbol | |
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| ID | 8228462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5869719 |
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| End bp | 5872178 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932705 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003089222 |
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| Protein GI | 255038601 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.163752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTA CCTCGATGAA AACTTTACTT CAACTACTCA TGTCCATTCT GATCCCGGGG
CTGATCTGCT GCCAGGATTC ATTTGCCCAG GTCGCTCCCG CGGGCGGGAG TATCAAAGGC
ATCGTGGCCG ATTCCGCTTC CGGTAAAACG CTGGATTTTA TTACCATTAA CCTCATGAAG
GACAAAACCA CCGCCGTGAA AGCCGATTTT TCCAAGGGCG ACGGTTCTTT TGTTTTCGCG
AACCTGAAAC CGATGAAGTA CATGGTGGTG CTCGTGGGCG TGGGATACAA AAGCAGGTCC
ATCGACGTCG ATCTTGCAGA CAGCACCCGC CGGCATGTCG ATTTGGGCCA GGTTACCATC
AGTCCGCAGG CCGTAGGGCT TAAAGAAGTG ACGGTTACCG CATTGAAACC CATTGTAAAG
CAGGAGGTCG ACCGCATTAG TTACGACCTC GAAGCCGATC CCGAAAGCAA AGTGTACAGC
GTGCTGGATA TGATGCGGAA AGTGCCTTAC CTGTCGCTCG ATGCCGAGGA TAACATTTTC
CTGAAAGGCA ATGCAGATTT CAGGATATTG ATCAACGGGA AGCCGTCGAG TATGGTCGAG
CGGAGCTACA AGGACGTGCT GCGGAGTATG CCGGCATCGT CTATCGTGCG GATCGAAGTG
ATTACTACGC CGCCGGCAAA ATACGATGCG GAAGGGCTAG CAGGAATTAT CAACATTATT
ACCAACAAAA AAATCGACAA CGGGTATAAT GGTACCCTCA ACGTCAGTGA ACGGTTCCCG
ACAGGCGGGC CGGGAGTCGG TGGTTCGCTC TCGGCCCAGC TCGGGAAGGT GGGAATGTCG
GTAAATGCCG GTTTGAGCCA GTATATCAAC CCTTCCACAC AATCGATTAC CAACCGGGTC
ACGACGGGCA TTGACCCAAC GGAGCTCAAC CAGCGCGGGT GGAACAAGGT GAATAACAAA
AACGGCTACA TTGGCTATGA GATTACCTAT GAGGTTGATA CGCTCAACTT GCTGAGCGCG
CAATTGAACG TCAATGGCGG CCGGAACCGG GAGAATGGCT ACCAATCGTC GCTCCTGAAC
GGCGGCGACG AAATCCTGGA ACGTTATAAT GTCACCAATG CCAGTTCCGA CCGCGGCACA
GGCCGGGATG CGGCCGTGAA TTATCAAAAG GGTTTCAAAG CGGATAAGAA CCGGTTGCTC
ACCTTTTCTT ACCGCTATTA CGGCTACGAC AACAAGCAAA AAGGCAACCT CAACATTTCG
GACCGCATTA ATTACGAGCG CCCGGATTAC CGGCAGATCA ACGACCAGAG CTTTTCGGAG
CAGACATTCC AGGTGGACCT CGTGTACCCG GTCAAAAAGC TCAGTATCGA AGCCGGTATC
AAAGGCATTG TGCGCGACAA TAAGAGCGAT TTTCAATACC AGGTTTTCAA TGCAGAAACC
AATTCCTACG ACCTGGATGC GGGCATGAGC AACAAATACA ACAACATGCA AAAGGTGTTC
GGGGCATACA ATACTTACCA GTATAACTGG AAGAACTGGG GCATTAAGGC AGGCGCACGG
GTGGAGCAGA CGATCATTGA TGCGGACTTC ATTTCAACGG ATTCGAAAGT GAAGCAAAAC
TATTTCAACC TGATCCCCTC CGTATCGGTT AACCGGAAGC TTAAAAACAA TGCGGGTATC
AATTTAGGGT ACAGCCAGCG CATTCAGCGG CCGGGCATCT GGCAGCTCAA TCCGTTCGTC
GACCGGTCGA ACCCGAGTTT CGAACGCACG GGTAATCCGG ACCTCCGGCC GGCATTCGTG
AACGATCTGC AATTGAGCTT CAACAAGGCC AAAAAAGGAA ATATCAACTT CGGCGTCGGC
TACACCCATT TCAAAGACCT CATTTTCCAG ATCGCCGTAT TTGACCCCGA AACACAGATC
ACGCGCAGGT CTTATGGCAA CACAGGCCGC GCCAGGCTCA TCAGCGGTTT GCTGAATGCC
AATTATCCGA TCACAAAAAA CTGGAATTTC AGCACCAATC TGCGCATTGC GCACGGCAAG
GTAACGGGGT TGGTGAATGG CGTGGAGATC ACCAATAGCG GATTGATGTA CCAGTTTGCG
CTCTCCACCG GCTACCGGTT GCCCAAAGAC TGGCGCGTGA ATGCCAACTT CAATGCAAAC
GGGCCGAGCG TGAACCTGCA AGGCACCTCC AATTCCATCC AGAGCACGTC GTTCAGCGTG
AATAAGGATG TGGTGAAGGA TAAATTGTCG GTTTCGGCTG CGGTGAGCAA TCCTTTTACG
AAATTCAGGA GGTTCCACAA TGTAACATCA GGCCCGGATT TCGATCAGTT CAACGATCGC
TGGAGCTATT TCCGGTCGTA CAATTTCAGT GTGAACTACA AGTTCGGAAA GCTGAAAAAT
GGTATTAAAA AGAACAAAAG AGGCATTCGC AACGACGACG TGCAGAATGG CGGAAACTGA
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| Protein sequence | MNFTSMKTLL QLLMSILIPG LICCQDSFAQ VAPAGGSIKG IVADSASGKT LDFITINLMK
DKTTAVKADF SKGDGSFVFA NLKPMKYMVV LVGVGYKSRS IDVDLADSTR RHVDLGQVTI
SPQAVGLKEV TVTALKPIVK QEVDRISYDL EADPESKVYS VLDMMRKVPY LSLDAEDNIF
LKGNADFRIL INGKPSSMVE RSYKDVLRSM PASSIVRIEV ITTPPAKYDA EGLAGIINII
TNKKIDNGYN GTLNVSERFP TGGPGVGGSL SAQLGKVGMS VNAGLSQYIN PSTQSITNRV
TTGIDPTELN QRGWNKVNNK NGYIGYEITY EVDTLNLLSA QLNVNGGRNR ENGYQSSLLN
GGDEILERYN VTNASSDRGT GRDAAVNYQK GFKADKNRLL TFSYRYYGYD NKQKGNLNIS
DRINYERPDY RQINDQSFSE QTFQVDLVYP VKKLSIEAGI KGIVRDNKSD FQYQVFNAET
NSYDLDAGMS NKYNNMQKVF GAYNTYQYNW KNWGIKAGAR VEQTIIDADF ISTDSKVKQN
YFNLIPSVSV NRKLKNNAGI NLGYSQRIQR PGIWQLNPFV DRSNPSFERT GNPDLRPAFV
NDLQLSFNKA KKGNINFGVG YTHFKDLIFQ IAVFDPETQI TRRSYGNTGR ARLISGLLNA
NYPITKNWNF STNLRIAHGK VTGLVNGVEI TNSGLMYQFA LSTGYRLPKD WRVNANFNAN
GPSVNLQGTS NSIQSTSFSV NKDVVKDKLS VSAAVSNPFT KFRRFHNVTS GPDFDQFNDR
WSYFRSYNFS VNYKFGKLKN GIKKNKRGIR NDDVQNGGN
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