Gene Dfer_4786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4786 
Symbol 
ID8228392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5788454 
End bp5789698 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID644932635 
Productglycosyl transferase group 1 
Protein accessionYP_003089152 
Protein GI255038531 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0735512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTAC AACTCAGTAC TTTTCATTGG GAAGGTGGCG CCGGAGTGGC TGCGGCAAGA 
TTACACCAGG CATTGCTGAA CGCCGGGATC GATTCGCAAC TCATGGTCTC GCAAATTTCC
CGGCCCGGCC CGCAAACCAG CGCCTGGGCC GACACCCCCT GGAAATCGAA GAAAGCGTGG
GGAAATTTTG TGCTGGAACG GCTGCATTTT CTCCCGCAGG AAAAAGACAA GTCCGTTCGC
TTCGCATTTT CTCCCGCTGC CGCCGGCGCG GATATCAGCG AACATCCGCT CGTTCAGCAA
GCGAGCATCA TTCATTTGCA CTGGGTCAAT TTCGGATTTC TTTCGCTCCG CTCCCTCGAA
AAGCTGTTTG CGCTGGGGAA ACCGATTGTG TGGACGCTGC ATGACATGTG GACTTTCACC
GGCGGCTGCC ATTACAACCG CGGTTGCGAC CATTACCTTT CGCATTGCCG ATACTGCCCC
TATCTCAAAA AACCGGGTGA GTATGACATG GCATTTACCC AATTTGTACA AAAACAACGC
TTATACAACC ATACACCGCT CACGCTCATT TCGCCAAGCC GGTGGCTGGA TAACCTCGTG
CAAAAAGCCG CACTCACGAC TGGAATGCCT TCAAAGGCCA TCCCGAACTG CATTGACACC
GAACTTTTCA AACCGGGCAG CCAGCCCGAA GCGAGGAACG CATTAGGCCT CCCACCCGAC
CGGAAGCTGC TGCTCTTCGC AGGTGCCAAT ACACAGGACC CGCGCAAGGG TTTTACGTAT
TTCCGGGAGG CGGTGCGCGA TCCACGCCTG GCAGATGTGG AAGTACTGAT ACTGGGAAAA
GGCAAGCCCG AAAACTTTGC GGATATGCCT GTGAAAGTGC ATTTCCTGGG CAAAATCTCC
GAAACCGAGC GGATGGTGCA AGCCTACAAT GCCGCTGATA TGCTGATTGT ACCGTCGCTG
GAAGATAACC TGCCCAACAC GATCATGGAG GCAATGGCGT GCGGAACTCC CGTGGCCGGC
TTTGATACCG GCGGCATTCC CGAGATGATC GACCACCTGG AAAATGGCTT CGTGTCCGTG
CCCAGGTCGG CGACTTCGCT GGCGGAAGGC ATTCAGTGGA TTTTGAAGCA TAATGCCGGC
GGCGCAGTTT CACAGAATGC CCGCCAGAAA GTGTTGCTGA ACTATTCGGA AGAAGTGATA
GCCGCGCAGT ATTCCCAACT TTACCAATCG CTGCTTCATG GATAA
 
Protein sequence
MVLQLSTFHW EGGAGVAAAR LHQALLNAGI DSQLMVSQIS RPGPQTSAWA DTPWKSKKAW 
GNFVLERLHF LPQEKDKSVR FAFSPAAAGA DISEHPLVQQ ASIIHLHWVN FGFLSLRSLE
KLFALGKPIV WTLHDMWTFT GGCHYNRGCD HYLSHCRYCP YLKKPGEYDM AFTQFVQKQR
LYNHTPLTLI SPSRWLDNLV QKAALTTGMP SKAIPNCIDT ELFKPGSQPE ARNALGLPPD
RKLLLFAGAN TQDPRKGFTY FREAVRDPRL ADVEVLILGK GKPENFADMP VKVHFLGKIS
ETERMVQAYN AADMLIVPSL EDNLPNTIME AMACGTPVAG FDTGGIPEMI DHLENGFVSV
PRSATSLAEG IQWILKHNAG GAVSQNARQK VLLNYSEEVI AAQYSQLYQS LLHG