Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4711 |
Symbol | |
ID | 8228317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5688573 |
End bp | 5690216 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644932560 |
Product | secreted protein-putative xanthan lyase related |
Protein accession | YP_003089077 |
Protein GI | 255038456 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.421509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TACTCTTACT GGTTGCAATC GTTATTTCTC ATCTCACACC GCGGGCTGTT TCCGCACAGT CGTTCGAGGC GGATGTGATC GTATACGGAG GCACCTGTGC GGCGGTTACG GCGGCGGTCC AGGTGGTTAA GTCAGGTAAA ACGGTGCTCG TGGTGTCGCC CGACAAGCAT TTGGGCGGGC TTTCGTCTGG CGGGCTCGGC TTCACCGATA CCGGCAACAA ATCGGTGATC GGCGGGCTCG CTCGTGAATT TTACCACCGC GTTTTCCTGC ATTACGACAA GCCCGAAGGC TGGCAATGGC AGAAAAAAGA AGAGTACGGC AACAAAGGCC AGGGAACCGT GGCGATGGAC GGCGCCGAGC GCACGATGTG GATCTTCGAG CCGCACGTCG CCGAGCAGGT GTTTGAAGAT TTTGTGAAAG AAAACAACAT CAAAATCTAC CGCGACGAAT GGCTCGACCG CAGCAAGAGC GGCGTTCAGA AAAGCAATGG CCGCATTGCT TCTTTCAAAA CATTGAGCGG CAAGACGTTC AAGGGAAAAA TGTTCATCGA CGCCACTTAT GAGGGCGACC TCATGGCCGC TGCGGGTGTA AAATACCACG TGGGCCGCGA AGCCAACAGC GTTTATAATG AAGAATGGAA TGGGGTTCAG GCGGGCGTGT TCCAGCACCG CCATTATTTT GCCAAAAACA TCAGTCCCTA TAAAGTGGAA GGCGACCCAA AGAGCGGTTT GCTGCCCTAC GTAACGTCGG AGAAAATCGC TAAAAACGGT TCAGGGGATA ACAAAATCCA GGCTTACTGC TTCCGGATGT GCCTCTCGTC GCATCCCGAC AACCGCATTC CGTTCGCCAA ACCCGCGGGT TACGACCCGG GTAAATACGA GCTGCTCGCC CGTGTGTACA AAGCCGGCTG GACAGAAACT TTCGACAAAT ACGACCCCAT TCCCAACCGT AAAACGGATA CCAACAACCA CGGCCCGTTC AGCACCGACT TCATCGGCCA GAACTACGAC TACCCCGACG CTACGTACGA ACGCCGCAAG GAGATCATTA AGGAGCACGA GGTATATCAA AAAGGCCTGA TGTACTTCCT CGCCAACGAC CCGGCCGTTC CTGCCGACGT GCGCGCCAAG GTAAATGAAT GGGGCTTGCC CAAAGATGAA TTCAAAGACA ATGGCGGCTG GCCGCACCAG ATTTACGTGC GCGAGGCGAG GAGAATGCTG GGCAAAAGCG TAATGACCGA GAACGAGACA TTGGGCAAAA AAGCCGTGCA GGAATCGGTT GGGATGGGTT CCTACTCGCT CGACGCGCAC AATGCGCAGC GTTACGTGAA AGAAGACGGT TTTGTGCAGA ACGAGGGCGA CATCGGCGTG CATCCCAAAA CCCCTTACGG CATTTCCTAT GGCGCTATCG TCCCCAAAAA GGCAGAATGT GAAAACCTGC TTGTGCCCGT GTGCGTGTCG GCGTCGCACA TTGCCTACGG CTCGATCCGC ATGGAGCCCG TGTTCATGAT CCTCGGCCAA AGTGCCGCTA CGGCCGCCGT GCAGGCGATC GACGGCAAGG TGGCCGTGCA GGATGTGGAT TATGGCAAAT TGAAAGAACA GTTGCTTAAA GACAAGCAAA AACTGGAACT ATAA
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Protein sequence | MKKILLLVAI VISHLTPRAV SAQSFEADVI VYGGTCAAVT AAVQVVKSGK TVLVVSPDKH LGGLSSGGLG FTDTGNKSVI GGLAREFYHR VFLHYDKPEG WQWQKKEEYG NKGQGTVAMD GAERTMWIFE PHVAEQVFED FVKENNIKIY RDEWLDRSKS GVQKSNGRIA SFKTLSGKTF KGKMFIDATY EGDLMAAAGV KYHVGREANS VYNEEWNGVQ AGVFQHRHYF AKNISPYKVE GDPKSGLLPY VTSEKIAKNG SGDNKIQAYC FRMCLSSHPD NRIPFAKPAG YDPGKYELLA RVYKAGWTET FDKYDPIPNR KTDTNNHGPF STDFIGQNYD YPDATYERRK EIIKEHEVYQ KGLMYFLAND PAVPADVRAK VNEWGLPKDE FKDNGGWPHQ IYVREARRML GKSVMTENET LGKKAVQESV GMGSYSLDAH NAQRYVKEDG FVQNEGDIGV HPKTPYGISY GAIVPKKAEC ENLLVPVCVS ASHIAYGSIR MEPVFMILGQ SAATAAVQAI DGKVAVQDVD YGKLKEQLLK DKQKLEL
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