| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4708 |
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| Symbol | |
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| ID | 8228314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5681717 |
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| End bp | 5685010 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932557 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089074 |
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| Protein GI | 255038453 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGA CAGCTACTCA ACTCATGCTT GCCCTTGTGT TCATAGCGAC AGGTTACGCA
CGTGAGGGAA GCGCACAATC CCTGCTCAGC CAGAAAGTAA CGGTGATGGC AAACGGCAGC
GAAGTCAAAA AAGTCCTGAG CCAGGTCGAA AAGCAAGCCG ATGTACGGTT TGTATTCAGT
TCCAAGCTGA TCAAATCAGC GCGGAAGGTG ACAGTTTCCC TCAAAGACAA GCCTTTGTAC
GAAGCCCTCG ACCATATTCT CACGCCGCTG GGGCTCGATT ATGAAGTTTC CGGCAAGATC
ATCATCCTGC GAAGAATAGA AGCCGCATCG CCCGACGCGC CTCCGGCACC GGAATCACCG
GCCAATGCGC CGAAGCGAAA GGTAGCCGGC AGGGTACTGG ACGGAGAAAC GAACACCGGC
CTGCCTGGCG TCAGCATTGT GCTGAAAGGA ACACAAACCG GCACCACCAG CAACTCCGAG
GGTAATTTCC AGCTCGAAAT CCCTGAATCG GCGGCAGCCA ATTCCGTACT CGTTTTCAGT
TTTGTGGGTT ACAAATCGCA GGAAATCGTG CTGGGCAGCC AGAACGAGCT GACCATCAAT
ATGGTGCTGG AAGACAAGTC GTTGCAGGAA ATCGTCGTGA TCGGTTACGG CCAGATCAAG
AAAAGCGACC TTACCGGCTC GGTTTCGTCC ATTAAATCGT CGGAACTGAA CGCATACCCG
GCTACCAACC TCGTGCAATC GCTCGCAGGA CGTGCGGCGG GCGTGTATGT ATCGCAAAAC
ACCGGCGCGC CCGGCAGCCC GATCAGTGTG CGGGTGCGCG GTACCAACTC CATTCAGGGA
AGTAACGAGC CGCTTTACGT GGTGGACGGT TTTCCCTATT CCGGCAGCCC TACTTTGCTC
AACAACGCCG ATATCGAATC CATTGAAGTG CTGAAAGATG CTTCGGCAAC GGCCATTTAC
GGCTCGCGCG GCGCAAATGG AGTGGTTTTA ATCACCACTA AAAAAGGCAA GGCCGGCCGT
GTGAGCGTCG ATTACGACGG CTACTACGGC GTGCAGACGA TCCGCAAAAA GCTGGATTTG
ATGAATGCCA CCGAATATGC CAATTTCTAC AACGAGCATG CGGCCAACGA CGGCCTCGCC
CCGCGGTTTA CGCCCGACCA GATCGCCGGC TTCGGTGAAG GTACTGATTG GCAGGACATC
GTTTTCCGGT CGGCACCGGT GCAGAACCAC GCATTGACGG TAAGCGGCGG TAACGAAAAA
ACGCGGTTTT CGGTCGCTGC CAGCAATTTC AGCCAGGACG GCATCGTGAT CGGCAGTGAC
TACGTCCGGA ATGCATTGCG CATGAACCTC AGCTCCGACA TCGGTAAAAA ATTCAAATTC
GACCTCAGCA CCCTCCTCAG CCGCATCAAT TCCGACCGTA AGAACTCGGA GAAAGGCAAC
CGGGGCGGAA CGCTCATGTC GGCCATGCTA TCCGGCTATC CGACCATCCC GGCCACGTTG
CCCGACGGCA GCTATTCGCG ACTGGCGGAG GCTTACGCGT GGGGTTCCAA TGTGATTACC
AACCCGCTGA ACTACATGTA TCAGTATTCG GATATGATCC GCTCGAACAA AATCCTTACC
AACGGCGCCA TTACATTTGA GCCGGTCAAG GGATTGATGA TCAAGACATT GGCTGGTGTT
GAAAGCACGG ATGACCGCAC CGATACCTAC ACCACTACCA GATTTGTAAA TTCGAAAGGC
AGTGCAAATG TAGGAACACA GCGCGTGACC AGCCTTTTGA GCGAAAATAC GATCAGTTAT
CTCAAAGACT TCGGTAAACA CAGCGTGTCG GCCGTGGCGG GTTTTACCTA CCAGGATTAT
ACACAAACTT CGCTTACTGC TAGTGGAAGC GGTTTTATCA GTGACAATCA GGAAACGTAC
GACATCGGCG CTGCCGCTAC ACAGGGCGTT CCTAGCACAT CCTATTCAAA ATGGGCGTTG
CTGTCCTACC TGGCGCGGGT GAATTACACA TTCAACAGCA AAATCCTCGC TACCGCCAGC
TTCCGTGCGG ATGGCTCGTC CCGTTATAGC GCGGGACAGA AATGGGGCTT TTTCCCGTCC
GGTGCATTGG CATGGCGCAT GTCCGAAGAA GAATTTATCA AAAACATTCC ATTCGTTTCG
GACCTGAAAT TACGGGTAGG CTATGGAGAA ACGGGGAACA CGTCCATTAA CCCTTATTTT
ACACTCAATC AGCTTAATTC GGCCCCGGTG GTGTTCGGTG ACGCATTTAT GACCTCCTAT
GCGCCGGGTA CCCGGCTCGC CGGCTCGCTG CGGTGGGAAA CCACGGCCCA AACCGACTTC
GGTATCGACC TCGGCCTTTG GAACAACCGC GTAAATGTGA CGGCCGACTA TTACATCAAA
AACACCCGCG ATCTGCTGAA CAGCGTCGCA TTGCCTTCCT CGCTGGGCTT CACCCATACG
ATCCAGAATA TCGGGAAAAT CCAAAACAAA GGTTTTGAGC TCGGGGTGAA TGCGGCCGTG
CTGGAAGGGG CGTTTAAATG GAATGTGTCG ACCAATTTGT CCATTAACCG GAACAAAGTG
ATGAAGCTGT ATGGCGGAAA CGACATCCTG GGGCAGACAA TCGGTGCGGC GGTGAACGAT
AATGTGAATA TCCTTCGCGA AGGTTACCCG CTCGGATCTT TCTATGGCTA TGTGGAAAAA
GGATACGACG AAAAGGGTTT TATCGCCTAT GAAGATTACA ATAACAGCGG GAGCCGCGAC
GCAGGTGACA AGCGCATTAT CGGTAACCCG AATCCTAAGT TCACCTACGG CTTTAACTCC
ACGATGTCGT TCAAAAACTT CGAGCTGACG GTCTTCATCC AGGGCTCGCA GGGTAATGAC
ATTTTCAACC TCAGCGCGCA GGGCCAGGGC TACGACTACG GCCAGGCGCT CAACATGCCG
CGCGAGGTGT ACCTCGACCA CTGGACGCCC GAGAACACCG ATGCCAAATA CCCGGTCATC
AAAACCTCCT CACAGGCGCA GATGTCGGAC CGCTTCGTGG AAGATGGCTC TTACCTCCGG
TTAAAGAACA TCCAGCTGAG TTACAACCTG CCGGTGGCTA AGCTGCATAT CAAATGGATG
AAATACGGAC AACTGTATGT GAGCGGCCAG AACCTGATCA CATTGACCAA ATACTCGTGG
TACGATCCCG AAGTGAACTC TTACGGATCG GGGAATTCAT TTGTGCAGGG CGTAGACCAT
TACGTTTACC CGGTTGCCAA AACCACCACC GTGGGCCTCA GAATTGGGTT TTAA
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| Protein sequence | MQMTATQLML ALVFIATGYA REGSAQSLLS QKVTVMANGS EVKKVLSQVE KQADVRFVFS
SKLIKSARKV TVSLKDKPLY EALDHILTPL GLDYEVSGKI IILRRIEAAS PDAPPAPESP
ANAPKRKVAG RVLDGETNTG LPGVSIVLKG TQTGTTSNSE GNFQLEIPES AAANSVLVFS
FVGYKSQEIV LGSQNELTIN MVLEDKSLQE IVVIGYGQIK KSDLTGSVSS IKSSELNAYP
ATNLVQSLAG RAAGVYVSQN TGAPGSPISV RVRGTNSIQG SNEPLYVVDG FPYSGSPTLL
NNADIESIEV LKDASATAIY GSRGANGVVL ITTKKGKAGR VSVDYDGYYG VQTIRKKLDL
MNATEYANFY NEHAANDGLA PRFTPDQIAG FGEGTDWQDI VFRSAPVQNH ALTVSGGNEK
TRFSVAASNF SQDGIVIGSD YVRNALRMNL SSDIGKKFKF DLSTLLSRIN SDRKNSEKGN
RGGTLMSAML SGYPTIPATL PDGSYSRLAE AYAWGSNVIT NPLNYMYQYS DMIRSNKILT
NGAITFEPVK GLMIKTLAGV ESTDDRTDTY TTTRFVNSKG SANVGTQRVT SLLSENTISY
LKDFGKHSVS AVAGFTYQDY TQTSLTASGS GFISDNQETY DIGAAATQGV PSTSYSKWAL
LSYLARVNYT FNSKILATAS FRADGSSRYS AGQKWGFFPS GALAWRMSEE EFIKNIPFVS
DLKLRVGYGE TGNTSINPYF TLNQLNSAPV VFGDAFMTSY APGTRLAGSL RWETTAQTDF
GIDLGLWNNR VNVTADYYIK NTRDLLNSVA LPSSLGFTHT IQNIGKIQNK GFELGVNAAV
LEGAFKWNVS TNLSINRNKV MKLYGGNDIL GQTIGAAVND NVNILREGYP LGSFYGYVEK
GYDEKGFIAY EDYNNSGSRD AGDKRIIGNP NPKFTYGFNS TMSFKNFELT VFIQGSQGND
IFNLSAQGQG YDYGQALNMP REVYLDHWTP ENTDAKYPVI KTSSQAQMSD RFVEDGSYLR
LKNIQLSYNL PVAKLHIKWM KYGQLYVSGQ NLITLTKYSW YDPEVNSYGS GNSFVQGVDH
YVYPVAKTTT VGLRIGF
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