Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4653 |
Symbol | |
ID | 8228259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5617619 |
End bp | 5618473 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644932502 |
Product | transcription factor jumonji jmjC domain protein |
Protein accession | YP_003089019 |
Protein GI | 255038398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.538116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAG TGCCGATAGA AAAGCGCACC GGACTTACGC GCGAAGAATT CATCGAAAAT TATCTAAAAC CAAGTCGCCC GGTCGTTTTT ACCGACCTGG CAAAGGATTG GCCGGCTGTT CAGAAATGGA CTTTTGACTG GCTCCGCGAG AACCACGGAA ACCTGGATGT GCCTCTGGTG GACAACCACA TTCACGACGC TGACAAGTAT TTCCAGATCG CCAAAACCAT GAAATTCGGC GATTACCTGA GCCTGATCGA GAAAGGCCCG ACCGATCTGC GCATTTTTCT TTTCGATATT TTCAAGAAAA TCCCTGAACT CGCGGACGAC ATCCGGTTCC CGACGATCAT GGACGGCTTC CTGAAATCTT ACAAATTTGT ATTTTTCGGA GGAGAAGGTT CGATCACCAA CCTGCATTAC GATATGGACT GCTCGAACGT GTTCCTAACG CAGTTCCAGA CCCGCAAACA GGTGATTTTG TTCTCTCCCG AAGAAAGCCG CCGATTGTAT CACCACCCGT TCACGGTGAT GAGCAAGGTA AATCCGATTG ACCCGGATTA TGAAAAATTC CCGGCATTGA AAGGCGCCAC CGGCTATGAA ACGATCCTTT ATCATGGCGA AACGATCTTT ATTCCTTCGC TTTGGTGGCA TTATATCCGT TATGTGGATG GCGGTTTCAG CCTTGCATTG CGTGCCAACA ACTCCATTTT CACAGCGGTG AAGGGCGGTA TGAACCTCGT TCGTCACCAG TTTGTGGATA AAAGCATGAC CAAGCTGCTC GGTCTCGACT GGCAGCATTG GAAAGAAAAG AAAGCCGTTG AAAACGCACA AGGGCTTTTG CAGAAGCAGG CCTGA
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Protein sequence | MKLVPIEKRT GLTREEFIEN YLKPSRPVVF TDLAKDWPAV QKWTFDWLRE NHGNLDVPLV DNHIHDADKY FQIAKTMKFG DYLSLIEKGP TDLRIFLFDI FKKIPELADD IRFPTIMDGF LKSYKFVFFG GEGSITNLHY DMDCSNVFLT QFQTRKQVIL FSPEESRRLY HHPFTVMSKV NPIDPDYEKF PALKGATGYE TILYHGETIF IPSLWWHYIR YVDGGFSLAL RANNSIFTAV KGGMNLVRHQ FVDKSMTKLL GLDWQHWKEK KAVENAQGLL QKQA
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