Gene Dfer_4542 details

Gene Information

• Locus tag: Dfer_4542
• ID: 8228145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 5481375
• End bp: 5484716
• Gene Length: 3342 bp
• Protein Length: 1113 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644932388
• Product: hypothetical protein
• Protein accession: YP_003088908
• Protein GI: 255038287

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.139586
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTCGAA TGAAGCTGCA TACTGCTGGA TTGCTGCTCC TGTTCCTGGC CGCCTTTGGC 
CTGGAACAGG CAGTTGCCCA GCAGAAACCG GGTTATGCCA ATAGCTGGAT CAATTACGGT 
AAGCCCTATG TCAAAATAGG GGTTATTAAA AAAGGCCTTC ACAAGATAAC AATGACGTCA 
CTGCCGAAGG AATTCTCTTC GGCCGCTGTC GATAAATTGC AGCTTTGGCA CCGGGGCAAG 
CAAGTTTCGA TCATCAGTGC GAATAGCAGT GAAATAGTGT TTTTTGGAGT ACCTAACGAT 
GGTTCCAGCG ACTCGCTGCT CTATCGGCCT ATGAGCTCTC GCATGAATCC ATATTTCAGC 
ATGTATTCAG ACGAGAGCTC TTATTTCCTG ACTATCGGCG ACACGGCCGG TCTCCGGGCA 
AAGGCGACCA GCGAGCCGGT CAATGTAAAT GCGGCGGCGC TGCCAAGTCA CGATGAGAAG 
GTAACTACCG TTTTCCAGAC AGACTATTCG TTGAGTACGG TAAGCCCTGT TCGTCCCAAT 
TTTTTCAACA GCTTTTTCGA AATAGGGGCC AGCAGAACTG GCAAGATTGT GTTGTCGGGA 
GTGATGCACA ATAATGAGTT CACTTTGAAA AATTTGGTGG GAGGAGTTGA AAATGCGAAG 
ATCAAACTGC TCGTCCATGG CCGGAGCAAC AACGATCGGA GCATCGAGGT TTATGTAGGT 
AAAAATGCGA CGTCGCTCAG ACTGGTCGGG ACGATAAGGA ATTCAGGTTT TGGAGGTTCG 
GAGTATACCT TTAACATAAA ACCTGGCGAT GTAGACGATG CAAAAAAGGG CGTGCTCGGC 
CTGAAAAGCA TTACCACAGA AAGATCGGAG CGCTTCTCGC TCGCATATTA CGATGTGAGC 
TATCCACAGG CATTCGACAT GACCGGTCTG ACCGGAAAAG AATTCAACCT GAAACCTGCC 
AAAACTGGTT TCAACCGTGT ACAGGTAAAG GGCCTTCCCG CCAAATCTAC GCTACTTGAC 
ATATCCAACG TCGACACTCC CGTCGTGGTA AACGGATCAG GAGAAAATTA CATGGTGAAC 
GGTACACAGG GTAAAAATGT GCGGTTTTAT GCATCCAATG AGATTACTAC GGTAGCCGCA 
GCGAAAATCA AACCGCTGAA CCTGGAAGTA ATCGAACCTA AACAACCGAA TTACATCATC 
ATTACGACAC AGGGCCTCAT GCAAGGCGCA AACCAATATG CGGCCTACCG CAGTTCTGCG 
GATGGGGGCG GATTTAAGAC CATTATATTG AATGTTGCTG ATCTTTACGA TCAATTCAAC 
TACGGCGAAC CTAGTCCGCT TGGTATCAGA AATTTTATGG CCTACATGCT CGGAGAGGGC 
GGGAAAACGG ATAAACACCT GTTTTTAATA GGCAAATCTA TCACACACAA CGAAAGAATG 
ACAAGAGAGC TGCCGGACGA AGTACCGACC ATCGGATACC CTGCTTCGGA TGTGCTTCTG 
GTCGAGGGAT TGGCGGGTAC AGCGGCGGAA ATTCCAGCCA TACCGGTGGG AAGGTTATCC 
GCGATTTCAA ACCAGAACGT ACTCGATTAC CTTACAAAAG TGAAAGAATA CGAACACAAT 
GCGATCGGGG ATTATGGCTG GCGTAAGAAC TTCCTGCACC TCAACGGAGG TAAAAATACC 
GGCGAAATCA CGCAGCTGAA AGAGTTTTTG AGCGACCTGG AACCCACGGT TGCGAACGGG 
GTCGTAGGCG GAAAAGTGAT ACCATTCGTG AAGCAACAGC CGATCGCGGA AGTAGAATCG 
GTGAACATTA CCGCTGAGGT GAACGCGGGA GCCGGTTTGA TTACTTATTT CGGGCACGGT 
TCAGCGACGG TTACGGATCT CGATATGGGG TATATAACGG ACGTTAAACG TGGCTATAAC 
AATTTTGGGA AATACCCGAT GATGTATTTC AACGGATGCG GTGTGGGTAA CATTTTCGCC 
GGCCGCTTTA ATCCTAACCC GAATGCGACC AGTGACAGGA TCACGCTGTC ACTCGATTGG 
CTGCTGGCGA AGGACCGCGG AAGCGTTGCA ATCATTGCGA ATTCGTACGA GAGCTTCGTG 
AGCCCGTCAG CGCAATATTT GGAACAGTTG TACAAAAATA TGTTTGCCGT TCCGTCGACC 
GTGAATTTCT CGATCGGCAA AATCCAGATA GCGGTGGCCG AGGCGATTAT TTCCAAGACA 
AAAGACAAAT ATGCAGTTGC CAACATTCAC CAATCGCTCT TGCAGGGCGA TCCGGCGCTA 
AAACTGGTTA CGGTAAGCAA TCCCGACTAT GCGGTGAATT CAGAACAAAG CATTTCACTT 
TATTCTGAAT CTGGCAACAA AACCATTGAT CAATCCGACT CTGTGCGAGT GGCGGTTGTG 
CTGGAAAATA AGGGACGATT CGTAGCGGAC CAATCTATAA CGGTCGATGT GGCTTATGTA 
GGAAATAGCA CTGTTACGAA ATCGGTAGTG GTGAAATCGT TCCCGGCTCG CGATACCATT 
ATGGTTTCTT TTGCAAACAG GAGGGATTTG GATAAAATCA CAGTGAATAT TGACCCAAAA 
CACCTCGTCA AAGAAATGGA CCTTTCCAAC AACCTGGCGG AAATGGATAT CAATTGGGAC 
ATGGTCAAAG ACATGAATTT CTTCTCGTCT GCAAACAATA GGGACGTGGT GCCGCCGATG 
CTTCACGTCA GGTTCAACGG TACGCTTCCC AAAGACAATG AGCAATTGAA CCCAAATCCA 
ACTATTAACA TTACACTTCG GGATGACCGC CAGCTCTTTG CCGACACCGA TCTGGTCGAG 
GTATATTTGA AGCGGTGCCC GGATAGCTCT TGCGAGTTTG AGAAACTCAG CTACACTGCC 
GCAGGAATAA GTGTTGATTC GCTGGATAAT TACAGTTTCC GTATTAACTA CCCAACTACC 
GGCCTGGTGG CGGGAGAATA CGAATTGCTT GTGAATGCCA AGGACAGGGC AGGTAACTTC 
TGCACCCAGC CTTACCAGAT TTCATTCCGC ATATTGGAAG CAGGTGATGC AGGCATCAAG 
CTCGTAGCCA GCCCCAATCC GGCGACTACG TTCGTACGGT TCGAGCTCAG CGATGTTAGT 
GTCTCCGGCC CTATCGTAAT CAAATATTCT ATCTATTCCC TGACAGGCGC CTTGGTGGAG 
GAAAAAGAGT TTCGCGACAC GGCAGGCTCA CGAAAACTGG ATTGGTATTG GAATCCATCA 
TCGTCATTTG CGGCTGGACT ATTTACTTAT AAGGTAGTTG TGTCCGGGCA GGATGGCCAG 
ACATTGAGAC AGCTTACTGG AAAAGTAGTG GTAACGAAAT GA 

 

Protein sequence

MRRMKLHTAG LLLLFLAAFG LEQAVAQQKP GYANSWINYG KPYVKIGVIK KGLHKITMTS 
LPKEFSSAAV DKLQLWHRGK QVSIISANSS EIVFFGVPND GSSDSLLYRP MSSRMNPYFS 
MYSDESSYFL TIGDTAGLRA KATSEPVNVN AAALPSHDEK VTTVFQTDYS LSTVSPVRPN 
FFNSFFEIGA SRTGKIVLSG VMHNNEFTLK NLVGGVENAK IKLLVHGRSN NDRSIEVYVG 
KNATSLRLVG TIRNSGFGGS EYTFNIKPGD VDDAKKGVLG LKSITTERSE RFSLAYYDVS 
YPQAFDMTGL TGKEFNLKPA KTGFNRVQVK GLPAKSTLLD ISNVDTPVVV NGSGENYMVN 
GTQGKNVRFY ASNEITTVAA AKIKPLNLEV IEPKQPNYII ITTQGLMQGA NQYAAYRSSA 
DGGGFKTIIL NVADLYDQFN YGEPSPLGIR NFMAYMLGEG GKTDKHLFLI GKSITHNERM 
TRELPDEVPT IGYPASDVLL VEGLAGTAAE IPAIPVGRLS AISNQNVLDY LTKVKEYEHN 
AIGDYGWRKN FLHLNGGKNT GEITQLKEFL SDLEPTVANG VVGGKVIPFV KQQPIAEVES 
VNITAEVNAG AGLITYFGHG SATVTDLDMG YITDVKRGYN NFGKYPMMYF NGCGVGNIFA 
GRFNPNPNAT SDRITLSLDW LLAKDRGSVA IIANSYESFV SPSAQYLEQL YKNMFAVPST 
VNFSIGKIQI AVAEAIISKT KDKYAVANIH QSLLQGDPAL KLVTVSNPDY AVNSEQSISL 
YSESGNKTID QSDSVRVAVV LENKGRFVAD QSITVDVAYV GNSTVTKSVV VKSFPARDTI 
MVSFANRRDL DKITVNIDPK HLVKEMDLSN NLAEMDINWD MVKDMNFFSS ANNRDVVPPM 
LHVRFNGTLP KDNEQLNPNP TINITLRDDR QLFADTDLVE VYLKRCPDSS CEFEKLSYTA 
AGISVDSLDN YSFRINYPTT GLVAGEYELL VNAKDRAGNF CTQPYQISFR ILEAGDAGIK 
LVASPNPATT FVRFELSDVS VSGPIVIKYS IYSLTGALVE EKEFRDTAGS RKLDWYWNPS 
SSFAAGLFTY KVVVSGQDGQ TLRQLTGKVV VTK