Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4523 |
Symbol | |
ID | 8228126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5457370 |
End bp | 5458467 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644932369 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003088889 |
Protein GI | 255038268 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000285386 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.910238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG TTTCCCCGAT CCTGAATTAT ACCAAACATA AAAGAGTTTT ACTGCACATC CTGTTCTGGC TCGCCGTACT AACGATCCTG ACGGTCATTT ACGGTGCAGG CATGCCCGAT TACTGGCTCA CGATCGGCAT CGTGGCAATG TTCATGCCCA TTCATATCGG TTATTTCTAC CTGATCGCCT ACGTGATCAT CCCCCGGTAT TTCGACCGTA AGAAATATGT GCAGTTCGTC CTTTTTTTCG TGCTGATCGT CGTCGGTTCG ACGCTCGCAT TCAGGCTGAT GGAAATACTC GTGGCGGACC CGATCATTTA CAACGCCGTG AAAAAGAACG ATCCCACGTT CGTCTGGCGG AAGCTCGAAG GGACGTTCCG GCAGCAGCTG GCGAAGCCGA CGTACCTGAT CAGTGCGTTC GAGCAGACCA ATATTTTCGT CTGGATCGCA TTATCGGTGA AGTTTTTCAA AATGTGGTTC GATCGCAGGC AGGCGGCGAT GGAGGCTGAG CTGAATTTTC TCAAAGGCCA GCTGCACCCG CATTTTTTGT TCAACACACT CAATAACCTG TATGCACTGA CCCTCAAACA ATCGCCGCAG TCGCCGGGCG TCGTGATGGG CCTGGCGGAG ATATTGCGGT ACATGCTTTA CGAGGCCAAC ACGGAGATCG TGCAGCTCGA AAGGGACATT AGTATTCTCA AAAGTTATAT TGAACTTGAA AAGATCAGGT ACGAAGAGCG GCTGGACATT AATTTCAGCA TCAACGGATT AGCGCCTGAA TACAAAATTG CGCCGCTGCT GATTTTGCCG CTGGTAGAGA ATGCATTCAA GCACGGCGCA AGCGAGCAGA TCGGCCAGGC GTGGATCAAT ATGGACCTGA GGGTGAAAAA CAATGCATTG AAATTCAAAA TCTCGAACAG CAAACCCGAG ACGGCCGTGC AGGACGACCG GCCGCACCAC GTGAGCATAG GCCTCGCCAA CGTGCGCAAG CGGCTCGAGA TCCTGTACCC GGGCGCGCAC AACCTGAAAA TCATGGATGA CGAGGACGTG TTTGCCGTGA TCCTAGAAAT TGACCTGGAC AAACGATTGG AAATCTGA
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Protein sequence | MRPVSPILNY TKHKRVLLHI LFWLAVLTIL TVIYGAGMPD YWLTIGIVAM FMPIHIGYFY LIAYVIIPRY FDRKKYVQFV LFFVLIVVGS TLAFRLMEIL VADPIIYNAV KKNDPTFVWR KLEGTFRQQL AKPTYLISAF EQTNIFVWIA LSVKFFKMWF DRRQAAMEAE LNFLKGQLHP HFLFNTLNNL YALTLKQSPQ SPGVVMGLAE ILRYMLYEAN TEIVQLERDI SILKSYIELE KIRYEERLDI NFSINGLAPE YKIAPLLILP LVENAFKHGA SEQIGQAWIN MDLRVKNNAL KFKISNSKPE TAVQDDRPHH VSIGLANVRK RLEILYPGAH NLKIMDDEDV FAVILEIDLD KRLEI
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