| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4477 |
|---|
| Symbol | |
|---|
| ID | 8228080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5405570 |
|---|
| End bp | 5406775 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644932323 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003088843 |
|---|
| Protein GI | 255038222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.164371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCT TTCATGATCC TTCAAAACAA ATAAATTTCC TAAGTCAAAT ATTATCCAAC
GGGAAAAAGC CGTTGGCATT TTTCATATCT GCTGGTTGTC CATTAGGTGT AACCATGCCT
GCTGGTGCTT GGCCACTTAT TCCGGCAATA AAGGAGTTGT CGCAGAAAGT CAATGTACAC
TTCGCTGAAC CCGGCAACAT TTCTCATAGA TATCAAGATT TACTACAAGA AATTAGCTCA
GATGGCATTG ACCATGAAAA CATAGAACAA GTATTAAGTT TCATCAGAGC ACTTGGTCAT
GTTGCGGGGA AGGGAAAGGT AAGGGGGTTC TCACAAAATG ACCTAGCGGA AATTGAAAAG
GTGATATGCC ACAAAATCGT TGATTTAATA GATGTAGCTT TACCCGATAG TGAAACTCCA
TATCATCAGT TATCTGCTTG GATTGCCTCA ATCGACCGGG AACAAGCAGT CGATATATTT
ACTACAAATT ATGACCTTCT TCTTGAGCAA GCACTAGAAG AATCATTGAT CCCTTATTTT
GATGGATTCG TTGGGTCAAG AAACTCATTT TTTGACTTGA AGGCTGTTGA AGATAACCAA
ATTCCAAAGC ATTGGACAAG GGTTTGGAAA ATCCATGGCT CCCTTAATTG GTATAAGTCC
GACTCGAAAA TTCACAGGAG CACCGGCGTC AAAATCGACT CGATAAATTC GCCCCTTATT
TATCCCTCTC ATCTTAAATA CGATCAGAGC CGCAAAATGC CCTACTTGGC TCTATTGGAT
CACCTTACAA GATCTATAAA AAATGATTCA AGCGTACTTA TTACGTCAGG TTATTCCTTT
AATGATGACC ATATCAATGA TGCAATGCTT AACGCGTTAG TAGCCAACCC ATCCTCAATG
ATAGTAGCTC TACTTTTCGG AAATTTGGAA GGTTATCCCA AAGCATTGGC AATGGCAAAA
TCAAGGCCAA ACATAGGCCT TTGGGCACTC GACGAGGCTA TGATTGGCAC GAAGCGAGGA
AAATGGAAAG TAGTCAAGTA TAATCCAGAA GATAATATAG CTGGGGTTAT CCAAACCGAG
GATATTCAGG ACCCAAACGA TGGTTCGAAA ACTCTGAAGA CATGGAAGCT TCAACTAGGA
GATTTTCGAC ATTTCGGAAA CTTTCTCCAC CATCTTGTCG TCCAAGATAA TCAGCCTGCA
AAATGA
|
|---|
| Protein sequence | MQIFHDPSKQ INFLSQILSN GKKPLAFFIS AGCPLGVTMP AGAWPLIPAI KELSQKVNVH
FAEPGNISHR YQDLLQEISS DGIDHENIEQ VLSFIRALGH VAGKGKVRGF SQNDLAEIEK
VICHKIVDLI DVALPDSETP YHQLSAWIAS IDREQAVDIF TTNYDLLLEQ ALEESLIPYF
DGFVGSRNSF FDLKAVEDNQ IPKHWTRVWK IHGSLNWYKS DSKIHRSTGV KIDSINSPLI
YPSHLKYDQS RKMPYLALLD HLTRSIKNDS SVLITSGYSF NDDHINDAML NALVANPSSM
IVALLFGNLE GYPKALAMAK SRPNIGLWAL DEAMIGTKRG KWKVVKYNPE DNIAGVIQTE
DIQDPNDGSK TLKTWKLQLG DFRHFGNFLH HLVVQDNQPA K
|
|---|
| |