| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4181 |
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| Symbol | |
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| ID | 8227779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5048448 |
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| End bp | 5050160 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932024 |
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| Product | Glucose/sorbosone dehydrogenase-like protein |
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| Protein accession | YP_003088549 |
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| Protein GI | 255037928 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.100139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA TCAACAACTA TCCTATGCCG CGCTGCTGTG CGCTGCTATT CCTTCTTGTT
CTCACATCCC TGCGCATTTG CGCACAAACT CCCGAGGTGC GAATCAATTC GACGCCGGTC
ATCAGCGGGT TAACCTCGGC TATGCAGCTC GTGCACGCCG GCGACGGTTC GAACCGGGTC
TTTATCGTCG AACGCGCGGG CATTATCCGT GCCTATAACC CCGGGGCATT AAGCACGCCC
GTTGAGTTTC TGAATATGAA TAGCGGCGGG CAGGTAGTAT CTCAGGACGG TGAGGGCGGT
TTGCTGAGCG TTGCCTTTCA CCCCAATTTC CTAACCAACG GGTATGTCTA TACTTATTAT
ACCGATACCG CTGGTGACCT GGTGGTGGCG AGGTACACCT CCACTAACCC GCCCGGTAAT
ATCGTCCTGG CCAGTAGCCG CGTCGAAGTC CTGAAAATCC CGCATCCGAT TAATAACAAT
CACAATGGTG GTGAGCTGCA TTTCGGCTAC GAGGATGGTT ACTTGTACTT ATCCACCGGT
GATGGCGGTG CGGGTGACGA TCCGAACCAA AACGGCCAGA ATCCCCAGAG CCTGCTGGGA
AAAATTTTGC GTATTGATGT GGACCCACCC ATTGGAACAG TGGCTCCCTA TGTGATCCCG
CCGAGCAATC CGTTCGGGAA CGAGGTGTTT GCGCTCGGTT TGCGAAATCC ATTCCGATGG
AGTTTCGATC GCTCTACTTA CGATATGTGG ATCGGTGATG TGGGCCAGGG GGCTTTTGAG
GAAGTGAACC ACCGGACAGC CGCCAATGCA TCCGGCGCCA ATTTCGGATG GCGGTGCTTT
GAAGGAAATG GCTACACGCC CGGCATCCCG ATCAATGAAT GTCCCGATTC CGCCGGTTTT
GTGAAACCCA TTTACAGTTA TGCCACAGGA AGTGCGCGGG GGCGGTCGGT TGTTGGCGGA
GTGGTGTACA GGGGAAATGA GTGGCCGCTC ATGAAAGGCT TTTACGTCGG GATGGACTAC
TTCTCGGGCG ACATTCACGT GCTGAACGCC AGCGGCTCGG TGAAGCATTA TGAAACGTCC
ACTTTTACGA ATATCAGGGA TATTGGAGAA GATGAGGCCG GCGAAATTTA CGCCGTCGGG
GCTACTGCCG TATATCGGAT CGAGGCGGAG AACCCGCTGC CCGTAACACT TGTCAGTTTC
TCGGGTGCGC CTGCTGCCGA CGGGGTGCGG CTATCGTGGC AAACCGCGAT GGAAAAGGAT
TTCAGATCGT TCGAAATCGA GTACAGCGCC GATGCACGCC GTTTTGAAAA TATCGGTTCG
GTGCCTGGCG GAAGCGCGGC GGGAGGCTCA TATTCTTTCA CGCACAGCAC CACTGAAAGC
GGAAATCTCT ATTACCGACT CAAAATGGTG GATACCGACG AGAGTTTCCG GTATTCCAAA
ATGATCACCG TCGGGAAGGG CGGCGAGCGA ATCAGCGACC TTTTCGTTCG GCCTTCACTG
ATCAGCAGTG CTGAAATGAA TCTGCTGGTC GAAGAACCGT TCCTAACGCT GGAAGTCGTC
AATTCTGGTG GCCAGGTGGT GCTGATGGAG AAGATAGGCG GCAGAAGCGG CCCTGTAAGC
ATTCCGTTGG GTAACACCAC TTCAGGCATT TACGTGGTCC GCATGGCAGG TCACGACCGC
GTTGTCCAGC AAAAGGTCCT GGTACTCAGA TAA
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| Protein sequence | MKHINNYPMP RCCALLFLLV LTSLRICAQT PEVRINSTPV ISGLTSAMQL VHAGDGSNRV
FIVERAGIIR AYNPGALSTP VEFLNMNSGG QVVSQDGEGG LLSVAFHPNF LTNGYVYTYY
TDTAGDLVVA RYTSTNPPGN IVLASSRVEV LKIPHPINNN HNGGELHFGY EDGYLYLSTG
DGGAGDDPNQ NGQNPQSLLG KILRIDVDPP IGTVAPYVIP PSNPFGNEVF ALGLRNPFRW
SFDRSTYDMW IGDVGQGAFE EVNHRTAANA SGANFGWRCF EGNGYTPGIP INECPDSAGF
VKPIYSYATG SARGRSVVGG VVYRGNEWPL MKGFYVGMDY FSGDIHVLNA SGSVKHYETS
TFTNIRDIGE DEAGEIYAVG ATAVYRIEAE NPLPVTLVSF SGAPAADGVR LSWQTAMEKD
FRSFEIEYSA DARRFENIGS VPGGSAAGGS YSFTHSTTES GNLYYRLKMV DTDESFRYSK
MITVGKGGER ISDLFVRPSL ISSAEMNLLV EEPFLTLEVV NSGGQVVLME KIGGRSGPVS
IPLGNTTSGI YVVRMAGHDR VVQQKVLVLR
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