Gene Dfer_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4112 
Symbol 
ID8227710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp4964131 
End bp4964742 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content50% 
IMG OID644931955 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_003088480 
Protein GI255037859 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.771178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGA AGCATACAAC CAGACAAACC GAAAACCCAT TCACCAAACG CCGTGAGCCG 
CTTGGCTTTA TGCTTTGGTT GGGCGTTGCC GGCAGTTCGC TGTTGTTTAC TTCCATCTTC 
ATCACTTTCC TGCTGCGTGC GCATCACGAA ACCTCACATC TGGTGGCCTT GCCAGACATG 
TTCTGGCTGA GTACGCTGGT CATTCTGTTC AGCAGCATTA CACTGCACGA AGCCAACCTC 
GCTTTTACTA ACGAACGCTT CCTTCACTAC CGGGTATTCC TCGGCGCTAC CCTGCTGCTT 
GGCACCATAT TCATGATGCT GCAAGCAGGC GGATGGATGG AAATGGTCAA TTCGGGCGTT 
TTTAGCGGCA TCAATACCTC CGAAGGCTTT ATTTACCTGC TCACCGGCCT GCATTTGCTC 
CACATGATCG GCGGCGTGCT ATATCTCGGT TTCCTTTTCC GGAAGGCGGT CAGGAACAGA 
AGTTATGTTG ACTCTTTCGT TTACAGTGTT AACCCGCCAA ATCGGCTCAG AATCAGACTT 
TTTACGCGAT ACTGGCACTT CACCGGCGCT CTTTGGCTGG TGGTATTTAT CTTTTTGATC 
GTCTTGTATT AA
 
Protein sequence
MSPKHTTRQT ENPFTKRREP LGFMLWLGVA GSSLLFTSIF ITFLLRAHHE TSHLVALPDM 
FWLSTLVILF SSITLHEANL AFTNERFLHY RVFLGATLLL GTIFMMLQAG GWMEMVNSGV 
FSGINTSEGF IYLLTGLHLL HMIGGVLYLG FLFRKAVRNR SYVDSFVYSV NPPNRLRIRL 
FTRYWHFTGA LWLVVFIFLI VLY