Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4083 |
Symbol | |
ID | 8227681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4930104 |
End bp | 4931444 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931926 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_003088451 |
Protein GI | 255037830 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.323862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.192714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAA AAATTTTAAC GGAGCATATC AATGTCCCCG GTATCGAAAC CTTCGATGTT TATCGCAAAC AGGGAGGCTA TACTGCCGTT GAAAAGGCTA TCAAAACCAT GACCCCGGAA GAGGTGGTGG AAGAAGCGAA AAAATCCGGC GTGCGTGGCA GAGGTGGAGC GGGTTTCCCG ATGGGAATGA AATGGGGCTT CCTGGCCAAG CCCGAGGGCG TTCCCCGCTA CCTCGTGTGT AATGCCGATG AATCGGAGCC GGGTACGTTC AAGGACCACC ATCTGATGAA ATGCATTCCT CACTTGTTGA TAGAGGGTAT GATCATTTCA AGCTTTGCAT TAGGTGCCAA CAAGTCGTTC ATCTACGTGC GCGGCGAGCT CATGTACGTG ATCCGCATTC TGGAAAAAGC CATTGCAGAG GCAAAAGCGC AAGGTTTTTT AGGCAAAAAT ATCCTCGGCT CGGGCTACGA CCTTGAACTG GTCGTGCAGC CGGGCGGCGG CGCTTACATT TGTGGCGAAG AAACCGCATT GCTCGAATCG CTGGAAGGAA AAAGAGGTAA CCCGCGTAAC AAGCCGCCAT TCCCTGCGGT GAAAGGACTT TACCAAAGCC CTACCGTGGT GAACAACGTG GAGTCGATCT CCAATATGCC GTGGATTATC AACAATGGCG GCGATGCTTA TGCACAAATC GGCATCGGTA GAAGTACCGG TACGAAATTG ATTTCGGCGT CAGGCCACAT TCAGAAGCCG GGTGTTTACG AAATCGAGCT GGGTGTAAGT GTAGAAGAGT TTTTGAATTC GGATGAATAT TGCGGTGGTA TCCGTAAAGG GCACCATTTG AAAGCATTGG TAGCAGGTGG ATCATCCGTA CCCATTCTTC CTGCAAACCT CATTATGAAA ACGGCTGCCG GCGAAGATCG TCTGATGACG TACGAATCGC TTTCGGACGG TGGTTTTGCG ACAGGTACCA TGCTCGGTTC AGGCGGTTTT ATCGTTTTTG ACGAAACGGC CTGTATCGTT CGAAATACCT GGAATTTCTC GCGTTTTTAC CACCACGAAT CCTGCGGACA ATGCAGCCCG TGCCGCGAAG GGACCGGCTG GATGGAGAAA GTGCTTCACC GCATCGAGCA CGGTCACGGC AGCATGCACG ACATCGATTT GCTCGTAGAT ATTTCAAAGA AAATAGAAGG TAACACCATT TGTCCGCTCG GCGACGCCGC AGCCTGGCCC GTAGCCAGCG CGATCCGCCA TTTCCGCGAC GAATTTGTGT GGCATATCAC CAACCCGCAG GAAGCTACGG CTCCGGGCGC GGTTTACATG GGTGAAATGG CCCTGGTGTA A
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Protein sequence | MARKILTEHI NVPGIETFDV YRKQGGYTAV EKAIKTMTPE EVVEEAKKSG VRGRGGAGFP MGMKWGFLAK PEGVPRYLVC NADESEPGTF KDHHLMKCIP HLLIEGMIIS SFALGANKSF IYVRGELMYV IRILEKAIAE AKAQGFLGKN ILGSGYDLEL VVQPGGGAYI CGEETALLES LEGKRGNPRN KPPFPAVKGL YQSPTVVNNV ESISNMPWII NNGGDAYAQI GIGRSTGTKL ISASGHIQKP GVYEIELGVS VEEFLNSDEY CGGIRKGHHL KALVAGGSSV PILPANLIMK TAAGEDRLMT YESLSDGGFA TGTMLGSGGF IVFDETACIV RNTWNFSRFY HHESCGQCSP CREGTGWMEK VLHRIEHGHG SMHDIDLLVD ISKKIEGNTI CPLGDAAAWP VASAIRHFRD EFVWHITNPQ EATAPGAVYM GEMALV
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