Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4070 |
Symbol | |
ID | 8227668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4918413 |
End bp | 4918742 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644931913 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003088438 |
Protein GI | 255037817 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00101139 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00129674 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCTTAG CTATTTGGGG ATTTCAAAAA GCCGCTAAAT TTGTCAAGTC ACTCAAAAAC AAGCACACTA TGACGGATTT CGGGAGTAAT TTCAGGAAGC TGAGGGAATG GGCAGGACTA TCCCAGGAGG CATTGGGAGC TAGTTTGAAT GTGTCGGCTT CCGTGATCAA CAGAATTGAG AATAACAAAA GGAGACTGGA CATTCAGATA CTGCAAAACC TTGCGAACGC TTTGCAGCTC GATGTGGCGC TGGTAGTGGC GGTAATGTTT AAAGGGAAGT CGGCATTGCC CAAGCAGCGG GCGGAGAAAG CGTTGCCGGT CCCCGCCTGA
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Protein sequence | MGLAIWGFQK AAKFVKSLKN KHTMTDFGSN FRKLREWAGL SQEALGASLN VSASVINRIE NNKRRLDIQI LQNLANALQL DVALVVAVMF KGKSALPKQR AEKALPVPA
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