| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4058 |
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| Symbol | |
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| ID | 8227656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4906287 |
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| End bp | 4907111 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644931901 |
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| Product | TonB family protein |
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| Protein accession | YP_003088426 |
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| Protein GI | 255037805 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000345217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000306076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAAA TAAGCCCGAA TGCGACACTG GATGATATAG TGTTCGCGGA TCGTAATAAG
GCGTACGGAG CTTTTGAACT TCGTCAGGGT TATCGCAGAG ATGTGACGAA GGCCACTATA
ATCGGAGCTG CGCTTTTTGT TCTTGCCATG TTTACACCGT CGATCATTAA CAGCTTGACG
GCCGGTAAGG AAGAAGAGGC GCCGATGGTT GAGGTGGACT TAATGAAGAT CCCGCCGCCA
CCAATTGACC CGGCAGAACC ACCACCGCCG CCACCACCAC CAGTGGAAGC GCCGAAGGTG
AACACAGTTA AGTTCTTGCC ACCAGAGGTT AAAAAGGATG AAGAGGTTCC GGAAGAGGTA
CCACCACCAA CAGTAGAAGA AATCAAAGAA GCTGTTGTTG CTGACAAAAC CATCGAAGGT
GACCCCAACG CGAATGAAAT TATTGTTGCA CCCGAAGCTG TTGCAGCACC TAGCAAAGGA
ACAGTAGTAG AGGCAGCCCC TGAGCCTGAA AAGGTATTTA CAGTGGTTGA GCAGCAGCCT
GAGTTCCCGG GAGGTACCAC AGAAATGTAC AAGTATCTTT CTAAGAACAT CAAATACCCA
AGTGCAGCAT CACGTGCTAA CGTTTCAGGA AGGGTGTTCT TGTCCTTTGT TGTTAACACC
GATGGAAGTA TCCAGGATGT ATCCGTACTG AAAGGCTTGG GTTTTGGTTG CGATGAAGAG
GCGATCCGCG TAGTGAAAGC TATGCCGAAA TGGAAGCCAG GAAAGCAATC AGGACGTGCA
GTTCGTGTGA AATACAACCT GCCAATCAAC TTCCAATTGG AGTAA
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| Protein sequence | MAEISPNATL DDIVFADRNK AYGAFELRQG YRRDVTKATI IGAALFVLAM FTPSIINSLT
AGKEEEAPMV EVDLMKIPPP PIDPAEPPPP PPPPVEAPKV NTVKFLPPEV KKDEEVPEEV
PPPTVEEIKE AVVADKTIEG DPNANEIIVA PEAVAAPSKG TVVEAAPEPE KVFTVVEQQP
EFPGGTTEMY KYLSKNIKYP SAASRANVSG RVFLSFVVNT DGSIQDVSVL KGLGFGCDEE
AIRVVKAMPK WKPGKQSGRA VRVKYNLPIN FQLE
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