Gene Dfer_4035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4035 
Symbol 
ID8227633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4887024 
End bp4888289 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content52% 
IMG OID644931878 
Productglycosyl transferase group 1 
Protein accessionYP_003088403 
Protein GI255037782 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00411563 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATATCC TGCTCATTCA CCAATATTTT CTGGAAGACA ATGCCGGCGG CGGCTCGCGG 
TGGAACGAGA TGGCGCGGAT CTGGGCCGAG GAGGGGCATG CCGTGACGGT GATCGCCGGG
GATATCCATT ATATGCACGA AACCGGGGCG GGAGTGAGGC GTGAGCGTTT CGCAGTCGGT
GTGAATGGGG ACGGCGTCAC GGTCATTCGC TGCAAGTTGC CGCGAAATTA TCATATCGGC
TTGCGGGGAC GGTATTGGGG CTATGTGTTT TTCGCGATGG CCGCCGTGTA TGCCGGTCTG
CGCAGGGCGG TTTCGGTATA TGACTGCATT ATAGCCACGT CGCCACCACT ATTTGCAGGC
ATTCCGGGGC TGATTCTTTC TAAATGGAAG CGCATTCCGT TCGTTTTCGA GATCCGCGAT
TTATGGCCGG AGTCAGCCGT TGAAATGGGT ATAGTCAAAA ACCGGATGCT CATTCGGCTG
GCAGTTTTAT TTGAAAAATA CCTCTACCGA ACAGCCGCGC GGATCATCGT GCTGACGCCC
GCCTTTCGCG AAAAGCTGAT CCTGACGAAA GGGGTTGAGC GTGAAAAAAT AGTGTTAATC
CCTAACGCGG CAGACTTTCG ATGGAGTGAA CAGGCGCTGG CAAGCTCGGC CCCGGTCGCA
TTACGCGCAA AGCTTGGCCT CGAAAAGAAA TTTGTGATTA TTTACGTAGG CGCACATGGA
TTGGCGAACG ATCTCATTCA ACTCTTGCAC GCCGCTGCAT TGCTCCGCGA TACGGATGCG
CACTTTCTGA TGGTGGGCGA TGGCATGCAG AAGCAAATGC TGATGGACAA AGTGGCGGCA
TTGGGCCTGC ATAATGTCTC ATTTCTGGAC CCGGTGCCTA AGGAGGAAAT TTTCCATTAC
ATTATCATGG CTGACGCCGG AGTAGCTGTT TTGAAGAAAG CAGAGGTTTT TAAAACCATT
TACAGTAACA AAACATTTGA CTACCTCTCC TGCAAAAAAC CGGTGCTGAT GGCGATCGAC
GGCATTTCGC GCATATTGAT AGAACAAGCA GCGGCAGGGC TGTTCGCCGA GCCGGGCAAT
GCGGCAAACT TTGCGGATAA AGTGCGGGTT TATATGAACG ACCGGGCGCT TTTGCGCAAA
CATGGTGAAA ATGGCTATGA CTTTGTCCGG CGGAATTTTG ATCGCGGCGT GCTGGCGAAA
GATTTGTTGA AAGGACTTCA AAAGATGCGC GTGAGCAATT GTAAAACAGA CCGTTTCGTA
AGCTGA
 
Protein sequence
MHILLIHQYF LEDNAGGGSR WNEMARIWAE EGHAVTVIAG DIHYMHETGA GVRRERFAVG 
VNGDGVTVIR CKLPRNYHIG LRGRYWGYVF FAMAAVYAGL RRAVSVYDCI IATSPPLFAG
IPGLILSKWK RIPFVFEIRD LWPESAVEMG IVKNRMLIRL AVLFEKYLYR TAARIIVLTP
AFREKLILTK GVEREKIVLI PNAADFRWSE QALASSAPVA LRAKLGLEKK FVIIYVGAHG
LANDLIQLLH AAALLRDTDA HFLMVGDGMQ KQMLMDKVAA LGLHNVSFLD PVPKEEIFHY
IIMADAGVAV LKKAEVFKTI YSNKTFDYLS CKKPVLMAID GISRILIEQA AAGLFAEPGN
AANFADKVRV YMNDRALLRK HGENGYDFVR RNFDRGVLAK DLLKGLQKMR VSNCKTDRFV
S