| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3997 |
|---|
| Symbol | |
|---|
| ID | 8227593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4844941 |
|---|
| End bp | 4845936 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644931839 |
|---|
| Product | YdjC family protein |
|---|
| Protein accession | YP_003088366 |
|---|
| Protein GI | 255037745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGCTATTCCT GCTAGCCATT CTTCCTTCCA TGTCTGCATT TGCACAAACC
GAACCTACTT ACGCCGAAAA GCTTGGGTAT CCGAAAGGCA AAAAAGTCCT CATTATCCAC
GTCGACGATG TGGGCATGTC GTACGAATCC AATCAGGGCG CTATCCGGGC TATTCGCGAG
GGTGTTGCTA ATTCGTTGAG CGTGATGATG CCTTGCGGCT GGGTGCCCGG TTTTGTGCAT
TATTGGAAAG AGAATAAGGA TATCGACGCC GGGTTGCATT TAACCATGAC TTCCGAATGG
AAAGATTACC GCTGGGGCCC GCTGGCCGGC AAAACGAATG TAAAAGGCCT CACCGACTCT
GAGGGCGCAT TGTGGCGAAG CGTGGCGGAT GTGGTGAAAA ACGCTTCGCC GGACGAAGTA
GAAACTGAAA TCCGCGCACA ACTGGAACGC GCCCGCACAA TGGGCTTCGA GCCCACGCAC
CTCGATTCGC ATATGGGCAC GCTCTTCGCG ACGCCGGAGT TTTTGGAAAG GTATTTGAAA
GTCGGAATGC AGGAAAAAAT CCCCGTCATG TTCCCCGGCG GGCACAATAC GGCCATTCGC
GGCGAAGAAA AAATGATCGA CAAGCAATTC GAAATGACCC AGAAAGTAGG AAAACAACTC
TGGGAAGCCG GCCTGCCCGT CCTCGACGAC CTCGAAAACA GCAGCTACGG CTGGAAAGGC
CCTGCAAACG GCGACAAATC CGAAAAAGCA TTACAGCAAT ACAAAACCGC CAAATACATC
GAAGCGATCG GCAAGCTGAA ACCCGGCCTC ACGATGGTGA TCATGCATTG CACGATCCAC
ACCGAAGTTT TCCCCCACAT CTCCGACTCC TGGCCCACCC GCGAAGGCGA TTTCCTGGCC
ATGATCGATC CGCAATTGCG GAAGTATATT GAGAAAGAAG GCATTGTGCT GACGACCTGG
CGGGAGGCGA TGCAGCGCCG ACAGAAGGTG AAGTAA
|
|---|
| Protein sequence | MKKLLFLLAI LPSMSAFAQT EPTYAEKLGY PKGKKVLIIH VDDVGMSYES NQGAIRAIRE
GVANSLSVMM PCGWVPGFVH YWKENKDIDA GLHLTMTSEW KDYRWGPLAG KTNVKGLTDS
EGALWRSVAD VVKNASPDEV ETEIRAQLER ARTMGFEPTH LDSHMGTLFA TPEFLERYLK
VGMQEKIPVM FPGGHNTAIR GEEKMIDKQF EMTQKVGKQL WEAGLPVLDD LENSSYGWKG
PANGDKSEKA LQQYKTAKYI EAIGKLKPGL TMVIMHCTIH TEVFPHISDS WPTREGDFLA
MIDPQLRKYI EKEGIVLTTW REAMQRRQKV K
|
|---|
| |