| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3881 |
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| Symbol | upp |
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| ID | 8227476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4723169 |
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| End bp | 4723813 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931722 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_003088250 |
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| Protein GI | 255037629 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.398551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTTAC TTTCCCAGAA ACCTTCCATA GCGGATCATT ACCTGGCCGA ATTACGTGAT
GTGAATTGTC AGACAGACCG GATGCGGTTT CGGCGGAATA TGGAAAGGGT GGGTGAGCTG
CTGGCTTACG AATTGTCCAA AACGCTCACC TTCAAAACGG AGAAAGTAGA AACGCCGCTC
GGTACGGCAC CGTGCCGCTC GATGCTGCAA CCCATTGTGC TCGCTACGAT CCTGCGCGCC
GGGTTACCAT TTCACCAGGG TTTCCTGAAC ATTTTTGACA AAGCCGATAA TGCATTCATC
GGTGCCTACC GCGGGCACCA CATCAATGCC GAGGAGGAAT TTACGGTGGA AATGGACTAC
ATTACCAGCC CCGATCTTAC CGGAAAAATC CTGGTCATGA TCGACCCGAT GCTCGCGACC
GGCCGGTCGA TGGAAAAGGT TTACCATGCA TTGCTGCGCT TCGGCATTCC TTCGCAAACA
CATATAGCCT CCGTTATCGC CAGTCCGGAG GGCGTGCAAT ACCTGCAAAG CCGCATTCCG
CAATGCCGCC TCTGGCTCGG GGCGGTGGAC CAGAAGCTGA ACGAACAATA CTACATTGTA
CCAGGCCTTG GCGACGCCGG CGACCTGGCT TTCGGCGAGA AATAG
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| Protein sequence | MFLLSQKPSI ADHYLAELRD VNCQTDRMRF RRNMERVGEL LAYELSKTLT FKTEKVETPL
GTAPCRSMLQ PIVLATILRA GLPFHQGFLN IFDKADNAFI GAYRGHHINA EEEFTVEMDY
ITSPDLTGKI LVMIDPMLAT GRSMEKVYHA LLRFGIPSQT HIASVIASPE GVQYLQSRIP
QCRLWLGAVD QKLNEQYYIV PGLGDAGDLA FGEK
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