Gene Dfer_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3844 
Symbol 
ID8227438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4681697 
End bp4682584 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID644931684 
Producthypothetical protein 
Protein accessionYP_003088213 
Protein GI255037592 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.182191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.290751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGC AGTTTCTGGG AAAGTTAAGG AAGTATGAAA TCCGGATGCG GAAAGCAGTG 
ACCAGCGAGC GTCACGGCAA TTTCCATTCG GTATTCAAAG GGTCCGGCCT GGAATTCGAC
GATCTGCGCT TGTACCAGTA CGGCGACGAC GTGCGGGCGA TCGACTGGAA CACTTCTGCG
AAAGGCCACG GCACGTTTGT CAAGATTTTC AAAGAGGACA AGGAGCAGAC GGCCTTCTTC
ATGCTCGATG TGAGCGCGTC CCAGCAGGTA GGGGAGATCA AAAAGCTCAA AATCGATATT
GCGAAAGAGA TTTGCGGCGT GCTTACGCTT TCGGCTATTC AGGAGGCGAG CCGCGTGGGG
TTACTCTGTT TTTCGGACAA AACGGAGCGC TATATCCGCC CGTCCGACGG CATGAAGCAC
GGTTATGGCC TTATTTCGGA GTTTTACAAG CTCGTTCCGG AATCTACCAA AACCAACATT
GCCGAAGCCA TTCTCGTGGC ATTGAATGTG CTTCGCCGCC GCAGCCTCAT TTTCCTCATC
TCCGATTTTA TCGACAACAA TTACCAGCAT AACCTCAAAG CACTGGCCCG CAAGCACGAC
CTGATCGTGA TCCATTTGTA CGACTCGCGT GAAGTGAATT TGCCCGGATT GGGCATTATC
CCGCTCTATG ACGCGGAAAA GAAGACGACC GTTTGGGTCA ATACTTCTTC GAGACAATAC
CGCGAGGAAA TGGCCAACCG CTTCGGTAAA CGCAGCGCCG AGCTCCAACG GCTCTGCCAC
CAGAACCGCG CCGACTATAT TTCCATCAAT ACCCAGGAAG ATTACGTGCC GGCCCTGATC
CACATGTTCA AAGTAAGGCG TTATACCAAA AGTACGGCCA ATGGCTAG
 
Protein sequence
MFEQFLGKLR KYEIRMRKAV TSERHGNFHS VFKGSGLEFD DLRLYQYGDD VRAIDWNTSA 
KGHGTFVKIF KEDKEQTAFF MLDVSASQQV GEIKKLKIDI AKEICGVLTL SAIQEASRVG
LLCFSDKTER YIRPSDGMKH GYGLISEFYK LVPESTKTNI AEAILVALNV LRRRSLIFLI
SDFIDNNYQH NLKALARKHD LIVIHLYDSR EVNLPGLGII PLYDAEKKTT VWVNTSSRQY
REEMANRFGK RSAELQRLCH QNRADYISIN TQEDYVPALI HMFKVRRYTK STANG