| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3772 |
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| Symbol | |
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| ID | 8227358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4587840 |
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| End bp | 4589528 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931604 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003088141 |
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| Protein GI | 255037520 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG CCAACGCGCA GCGCCGTAAA GATCGTGACA AGCAGGAAGT TAAGGAAGAG
GGTGTGATGA CGAGGCTCGA AGGGGAGTCG ATGGCTACCG AGGGAATGAA GTTCATGATG
AAGGACGAGC CCGACCGCGC ATTGCCGGTG TTTGAAAAAC TTGCCCAAAT CAATCCGCAG
GACGCCACCA CACATTATCT GGTCGCCACG GCGCTGATCA AGCTCGAAAA ATACGACGAG
GCCATCAATG CGTCGAAAAA GGCATTTGAC ATCGATAAAG AGAACATTTT CTACGCCCAG
CAACTCGCCG AGCTTTACGC CAAACGCCGC AAATACGCGG AAGCGGCCCA GATTTACGAA
ACACTTGTAG CCCGGAATCC CGAAAACATC GAATACGGAA TTGAACTGGC GGCGGTTTAC
GTTTTCAACG ACCAGTTCGA CAAAGCCATT GAAACTTACA ACAGGTTGGA AAAGTCGATG
GGTGTGACCG AAGAAATCAC GCACCAGAAA CAGCAGCTCT ATCTCCGCCA GAATAACCTG
GAAAAAGCAT TGGCGGAAGG CAAAAAACTC ATCGAAGCGG AGCCCGGCGA AGTAAGTTAC
CGCGTAGAAC TGGCCGAAAT GCTGATCGCG AACGACCGCA TCGTGGAAGC GGTGGCGCCG
TTGGAAGAAG CATTGAAAAT CAATCCCGAC GAAGCGCAGG CCCACGTGCT GCTAGCCGAT
ATTTACCGCC GCAACGGCGA TGTGCAGAAA TGCAACCAGG AACTGAAACA GGTTTTTGCC
AACCCAAACC TTGACGCCGA TCCTAAAATC CGCGTGCTTT CGGGCTACCT GACCATGTTA
AAGACCGAAA ACGAAGTGAA TGAGGCCATT TCACTTGCAC GCCAGCTCTC GGAAACACAC
CCCAACGAAG CCAAAGCGAC TGTCATTTAC GCCGATTTGC TAACTCGCCA GAGCAAGTTC
GCCGAAGCGC GCGACCTGTA CATCAAAGCC GCAGCCGCCG ACCCGAACGT ATTCCAGGTG
TGGGGCGCCA TTTTGCAGCT CGACGGCCAG CTCAACCAGC CCGACAGCAT GCTCGTGCAT
TCGGAAAAAG CGTTGGAGCT GTTTCCGAAT CAGGGAATGT TCTGGTATTT CAACGGAATG
GCTAACCTGA TGAAGAAAAA TTTCAGGGAG GCGACATCCG CATTGGAAGA AAGCCTGAAA
ATGATGGGCG AGAATCCCCA GCTGGTGCCA TTAATCCACG CACAGCTCGG CGATGCATTT
AACGGGATCG GCGATCACGA AAAATCCGAC GCAGCTTACG AGCTCGCATT GAAAGCCGAT
CCGAACAATG ACCACGTGCT GAACAATTAC AGCTATTTCC TGTCGCTCAG AAAGGAAAAG
CTCGATCTGG CGCTCAAAAT GTCCGAAAAG CTCGTGCAGC AGCATCAGAA TAACCCCACT
TACCTCGATA CCCACGCCTG GGTATTGTAC ATTCGCAAAG ACTACAAAAA AGCCAAGGAA
TACCTCGAAA AGGCAATGCT CGACAGCAGC TCGGTGAGTG GCACAATTGT TGAGCATTAT
GGGGATGTCC TGTTCAAATT AGGAGAACGG GACAATGCGG TGGCCCAATG GAAAAAAGCC
AAGAGAATGG GCGAAACCAC CGAACTTCTT GACAAAAAAA TAGCAACAGG TGCATTACAT
GAGCAGTAA
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| Protein sequence | MTPANAQRRK DRDKQEVKEE GVMTRLEGES MATEGMKFMM KDEPDRALPV FEKLAQINPQ
DATTHYLVAT ALIKLEKYDE AINASKKAFD IDKENIFYAQ QLAELYAKRR KYAEAAQIYE
TLVARNPENI EYGIELAAVY VFNDQFDKAI ETYNRLEKSM GVTEEITHQK QQLYLRQNNL
EKALAEGKKL IEAEPGEVSY RVELAEMLIA NDRIVEAVAP LEEALKINPD EAQAHVLLAD
IYRRNGDVQK CNQELKQVFA NPNLDADPKI RVLSGYLTML KTENEVNEAI SLARQLSETH
PNEAKATVIY ADLLTRQSKF AEARDLYIKA AAADPNVFQV WGAILQLDGQ LNQPDSMLVH
SEKALELFPN QGMFWYFNGM ANLMKKNFRE ATSALEESLK MMGENPQLVP LIHAQLGDAF
NGIGDHEKSD AAYELALKAD PNNDHVLNNY SYFLSLRKEK LDLALKMSEK LVQQHQNNPT
YLDTHAWVLY IRKDYKKAKE YLEKAMLDSS SVSGTIVEHY GDVLFKLGER DNAVAQWKKA
KRMGETTELL DKKIATGALH EQ
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