Gene Dfer_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3746 
Symbol 
ID8227332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4562117 
End bp4562539 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content43% 
IMG OID644931578 
Productpentapeptide repeat protein 
Protein accessionYP_003088115 
Protein GI255037494 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000154235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA AGAAATTGAT TATTAAGCCT AAACAACCAG CAATTATGGA AACGATCAAA 
GAAATCTCCC TGAATAGCGA ATGCGTCGTC ATCACCGCTC ATTGTGTAAT GCTTTCCAAC
TCTACATTCA ATGATGTAAA TATGAGCAAC ATATCGATCG TGGATGCCAA TTTGAGCGAT
TTGCATATTG AAGGCGCACA ACTCGGCGGT GCGGTGTTCG AAAACATAGG CATGTGCCCA
CCCGACCATC CCATGTATGA TCCGAATGCG GAACAGCGCC CGCTACTTTT TAAGCATTGT
GATTTGCACA AGAGTAAGTT AGTGAATTGC GACCTAAGCG GCGTAGAGAT TTCCGACTGC
AATATCGAAG GATTAAAAGT TAATGGCATA CTGATCTCCG ATTTGCTGGC AACCAGAAGT
TAA
 
Protein sequence
MPDKKLIIKP KQPAIMETIK EISLNSECVV ITAHCVMLSN STFNDVNMSN ISIVDANLSD 
LHIEGAQLGG AVFENIGMCP PDHPMYDPNA EQRPLLFKHC DLHKSKLVNC DLSGVEISDC
NIEGLKVNGI LISDLLATRS