Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3678 |
Symbol | |
ID | 8227263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4476995 |
End bp | 4478308 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931510 |
Product | threonine dehydratase |
Protein accession | YP_003088048 |
Protein GI | 255037427 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form [TIGR02079] threonine dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.376781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.173616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCA AAATACAGGG CTTTACGATT TTCGTAAAGC TCTTTTCATT GAATCCTATG AGCACTGCCC ATCCACTTCC GACTCTCGAT AACATCTTCC TCGCCGCCGA GCGCCTGCGC GGGGTGATCA ACCACACACC GATATTTTAT AATGCACACC TTTCGGAGCA GTACGGGGCC AATGTTTATC TCAAAAGAGA GGACCTCCAA ACCGTCCGCT CCTACAAAAT CCGCGGAGCC TATAACAAGA TGGCCAGCCT CACGCCCGAA GCCCTCGCGG GCTGGATCGT GTGTGCGAGT GCGGGCAACC ACGCGCAGGG CGTAGCGTAC GCATGCCGCA AAATGCAGGT GAAAGGCGCG ATTTTCATGC CTACCACTAC GCCGGCGCAA AAAGTAAAGC AAGTGCGGCT TTTCGGCCAG GAATGGATTG AAATCCATTT GGTAGGGGAC ACTTATGACG ATGCTTACCA TGCTTCGATG GCTTACCGCG ACAGCACGAA TGCGGTTTTT GTGCATCCAT TTGATGATTT GCAGGTGATA GAAGGGCAGG GGACCGTAGG GCTGGAAATT TTCAAAGATG CAGATTTTAA AATCGACTAT CTGCTGATGG CCATTGGCGG AGGCGGATTA GCATCCGGCA TCTCCACTGT TTTCAAACAG CTTTCGCCCA AAACCCAGCT CATCGGCGTG GAGCCGGAAG GTTCGCCTAC GATGCACAAG TCCATCCAGG AAGGGCACGT GGTGACGCTG GATAACATCG ACAAATTCGT CGACGGCGCG GCGGTAAGGC GGGCGGGGGA CCTTACATTT GATATTTGCA GCAAAAGCCT GAATCAAATA CTTCTCGTGC CGGAAGGCAA AGTCTGCTCC TCCATTTTGC AGCTTTACAA TGAAGAAGCG ATCGTGGCCG AGCCGGCGGG CGCCTTAACG GTATCTGCAT TGGATTTAAT TCGGGAAGAT ATCAAGGGGA AAAACGTAGT TGTACTCATC AGCGGCGGGA ATAACGACAT TACCCGCACG GAGGAAATCA AGGAACGTTC ATTGCTCTAC GAAGGTTTGA AGCATTACTT CATCATCCGC TTCCCGCAAC GCTCCGGCGC ATTCCGGGAG TTTTTGAATG TGCTCGGTCC GAATGACGAC ATTGCGCGTT TTGAATACGT GAAAAAGACG AACCGCGAGC AGGGACCGGC ATTGGTCGGC ATCGAGCTGA AAAGCCGCGA GGACTTCGCG CCTTTGATCG AGCGAATGGA TGCGAACCGG GTGGTTTATG AGTATCTGAA TGATCAGCCG GATTTGTTTC AGTTTATGGT TTAA
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Protein sequence | MHTKIQGFTI FVKLFSLNPM STAHPLPTLD NIFLAAERLR GVINHTPIFY NAHLSEQYGA NVYLKREDLQ TVRSYKIRGA YNKMASLTPE ALAGWIVCAS AGNHAQGVAY ACRKMQVKGA IFMPTTTPAQ KVKQVRLFGQ EWIEIHLVGD TYDDAYHASM AYRDSTNAVF VHPFDDLQVI EGQGTVGLEI FKDADFKIDY LLMAIGGGGL ASGISTVFKQ LSPKTQLIGV EPEGSPTMHK SIQEGHVVTL DNIDKFVDGA AVRRAGDLTF DICSKSLNQI LLVPEGKVCS SILQLYNEEA IVAEPAGALT VSALDLIRED IKGKNVVVLI SGGNNDITRT EEIKERSLLY EGLKHYFIIR FPQRSGAFRE FLNVLGPNDD IARFEYVKKT NREQGPALVG IELKSREDFA PLIERMDANR VVYEYLNDQP DLFQFMV
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