Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3558 |
Symbol | |
ID | 8227143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4352535 |
End bp | 4353509 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931393 |
Product | Polyprenyl synthetase |
Protein accession | YP_003087931 |
Protein GI | 255037310 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.358562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCAAC CCGCATCATT ACTTGAAAAA CTGCAAACTG AATTCGACCG GCATTCTTAC GGCGACGCCC CGGTGGAGCT TTACGAGCCG ATCAGCTACA TTATGTCGCT CGGCGGAAAG CGTTTCCGGC CGCTGCTGAC TTTGCTTGCC GCATCTATTT TTGATACAGA TATTGATAAA GCCATAAAAC CGGCGATGGC CGTGGAGGTG TTTCACAACT TCACGCTCAT GCATGACGAC ATCATGGACC GCGCTCCGCT GCGCCGGGGC ATGCCTACCG TACATGAGAA GTGGGATGCG AACACGGCCA TTCTTTCCGG CGATGTGATG CTGATCCGCG CTTATGACCT GCTGCTGGAC ATACCGAAGG AGCAATTACG GTCTGTTTTA GCACGCTTCA ACCGGACCGC TGCCGAGGTA TGTGAAGGCC AGCAGCTCGA TATGAACTTC GAAAAGCGCT GGGACGTGAC CGAAGCGGAA TATATTGGTA TGATCCGTTT GAAAACCTCT GTCCTGCTCG GATTCGCGCT GGAACTGGGC GGGATCATCG CCGGGGCGGA CGACGAAACG GTCCAGCTGC TTTATTCTGC GGGCGAAAAC ATGGGCATTG GGTTCCAGCT CAAAGACGAC CTGCTGGACG TGTACGGCGA TCCTGCCAAG TTTGGAAAGC AGGTGGGCGG CGATATTATT GCCAATAAGA AGACGTTCCT GCTCATTGAA GCGCTATCGA AGGCCAATGG CGACCTGAAA ACCGAGTTGG ACCGCTGGAT AAGTCTGGAT ACGTTCGATA ATGCGGAAAA GGTAGCAGCC GTGACCGGCA TTTACGACGC GCTCGGTATC AGGGCATTTA CCGAACATAA AATAAATGAA TATTTTTCGC GGGGAATAGC TAGCTTACAG CAACTGCGTT CAGATAGTGT TCAGAAGGAC GTGCTTTTGC AGTTTGTGGA TCAGCTTGTG GCGCGGGAAA AGTAA
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Protein sequence | MIQPASLLEK LQTEFDRHSY GDAPVELYEP ISYIMSLGGK RFRPLLTLLA ASIFDTDIDK AIKPAMAVEV FHNFTLMHDD IMDRAPLRRG MPTVHEKWDA NTAILSGDVM LIRAYDLLLD IPKEQLRSVL ARFNRTAAEV CEGQQLDMNF EKRWDVTEAE YIGMIRLKTS VLLGFALELG GIIAGADDET VQLLYSAGEN MGIGFQLKDD LLDVYGDPAK FGKQVGGDII ANKKTFLLIE ALSKANGDLK TELDRWISLD TFDNAEKVAA VTGIYDALGI RAFTEHKINE YFSRGIASLQ QLRSDSVQKD VLLQFVDQLV AREK
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