| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3555 |
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| Symbol | secA |
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| ID | 8227140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4347622 |
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| End bp | 4350966 |
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| Gene Length | 3345 bp |
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| Protein Length | 1114 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931390 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_003087928 |
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| Protein GI | 255037307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA TATTTTCCAA GCTATTCGGC ACGAAATCGG AACGGGACCT GAAAGAACTG
ACCCCGTACG TTGAGAAGGT GAATGCCGAG TATGCATTGC TAGCCTCCCT TTCGAATGAC
GAACTCCGGG CGCAGTCCGC GAACCTGAAA CAACATATTG CAGAGCAGCT GAAATCCGTC
GACGAGCAGA TCGCCGCATC GAGACAGCAG GCAGCGGACG AACCGAATGT GGATAGCAAA
GAGGCGATTT TCAAGAAGAT AGACGCTCTC GAACTGGAAA GAAACAAAGA ACTGGAAAAG
GTGTTGCTGG ATATTCTTCC GAAAGCTTTC GCGATCGTGA AAGACACTGC GCGCCGTTTT
ACAGAAAATG ATAAACTCGA AGTATCCGCC AACGCTTTCG ACCACGAACT AGCCTCCAAA
AAGGCGAATG TGACTATTAA CGGCGATAAA GCATATTGGA ATACCACCTG GGACGTAATC
GGCCAGCCCA TCAAATGGAA CATGGTGCAC TACGATGTGC AGCTGATCGG TGGTGTGGTG
CTGCACCAGG GTAAAATCTC CGAAATGGCA ACGGGTGAAG GTAAAACCCT CGTGGCTACG
CTGCCTTCCT TCCTGAATGC ATTGGCAGGA CAGGGCGTTC ACATCGTAAC CGTGAACGAC
TACCTCGCCA AACGCGATGC TGAGTGGAAT GCACCGCTTT TTGAATTCCA CGGCATGAGC
GTAGACTGTA TCGACCGCCA CCAGCCCAAC ACCATTGCAC GCCGCAATGC CTACAAAGCA
GACCTTACTT ACGGTACCAA CAACGAATTC GGTTTCGACT ACCTGCGTGA CAATATGTCA
CGGACGCCGG AAGAACTTGT GCAGCGCAAG CACCATTTCG CGATGGTGGA TGAGGTTGAC
TCCGTGTTGA TTGACGATGC GCGTACGCCA TTGATCATCA GCGGCCCCGT ACCGCGTGGC
GACGAGCAGG AATTTTTGGA ATTGAAACCA CGTGTGTCGA GGATCGTGGA GGCTCAGAAA
CGCCTTGCGA TGGACTTCCT GAATGACGCT AAAAAGAAAA TCCAGGCCGG CGATAAAAAA
GAAGGTGGTT TGGCATTGTT CCGCGCACAC CGCGGTATGC CGAAATACAA GCCTTTGATC
AAATACCTCA GTGAAGGCGG TATCAAGGCC ATTATGCAGG AATCGGAGTC GATTTACCTG
GCTGAAAACC AGAAACTGAT GCCGCAGGCA GATGCGCCGT TGTACTTCAC GATCGACGAG
CGCCATAACA GCATCGAACT CACCGAAAAA GGGATTGACT TCCTCACCGG CGAGTCCGAA
GAAACGAACT TCTTCATCCT TCCCGACATT GCCGTTGACC TCGATGCAAT CGAAAAAGAC
CCATCGCTCA ACGAGCACGA CCGCGTGATC GCCAAAGAAG CATTGATCCG CGATTATTCC
GTAAAAACAG CCCGTATCCA CACGGTCAAC CAGCTTTTGA AAGCATTTAC ATTGTTTGAA
AAAGACGTGG AATACGTGAT CATGGACGGT AAGGTGAAAA TCGTCGATGA GCAAACCGGC
CGTATCATGG AAGGCCGCCG CTATTCCGAC GGCTTACACC AGGCGATCGA AGCGAAAGAA
AGTGTACGCG TAGAAGATGC GACGCAAACC TACGCGACAG TAACACTTCA AAACTACTTC
CGGATGTATC ACAAGCTGGC CGGTATGACC GGTACGGCGG AAACGGAAGC GGGTGAATTC
TGGGAAATCT ACAAACTGGA CGTAGTAACG ATCCCTACCA ACCGTGGAAT CGTTCGTAAA
GACCAGGAAG ATAAAGTATA TCGCTCGGTG CGCGAGAAAT ACAATGCGGT AACCGACGAA
ATCGTGGAGC TCGTGGAAGC TGGCCGCCCG GTACTCGTCG GTACGACTTC CGTTGAAAAC
TCAGAGATCA TCAGCCGGAT GCTTACGCTC CGCAAGATCC CTCACCAGGT TTTGAATGCG
AAACAACACC AGCGTGAAGC GGAAGTGGTT GCAGAAGCCG GTAAGCCGGG CACTGTGACG
ATCGCGACCA ACATGGCCGG TCGTGGTACC GACATCAAGC TGACGCCGGA AGCGAAAGCT
GCGGGCGGTT TGGCGATCAT TGGTACGGAA CGCCATGAAA GCCGTCGCGT CGACCGCCAG
CTGCGTGGTC GTTCGGGACG CCAGGGTGAC CCGGGTTCAT CCCAATTCTT CGTGTCACTG
GAAGATAACC TCATGCGCCT CTTCGGCTCC GACCGGATGG CGAAGGTAAT GGACCGCATG
GGCCTCGAAG AAGGCGAAGT GATCCAGAGC AGCATGATCA CGAAGTCGAT CGAACGTGCG
CAGAAGAAAG TGGAGGAAAA TAACTTCGGT ATGCGGAAGC GCTTGCTCGA ATACGACGAC
GTAATGAACT ACCAGCGCGA TGCGATCTAT ACGCGCCGTC GCAATGCATT GTTCGGGGAT
CGTCTGGCGG TGGATATTGC CAACACATTG TTCGATGTGT GCGATGAAAT CGCGACCACT
GCCGGCAGCT ACGCCGAGCT CGAACTGGCC GCCATTACCA CATTGGGAAT GGAAGTGCCG
TTCACCGAAA ATGAATATGC AGCATTGAAA CCTGCCGATC GTTCGCAGAA ACTTTATGAT
GCGGCCGAAA AGCAATATCA GGACAAAAAC GATGCGATTT CGGGCAAAGC ATTACCTGTT
CTCCGTTCGA TTTACGCGGA GCGCGGCGCG ATGATTTCCG AAATCATGAT CCCGTTCTCG
GACGGCATCC GTCAGGCCGG CGTGGTGGTT GGCCTGCAAA AAGCCATCGA AAGCGAAGGT
AAGGACATTA CCCGCGAAAT GGAGAAGGCG ATCGTGCTTT CGCTCATCGA CCAGGAGTGG
AAAGAACATT TGCGCGAAAT GGACGATTTG AAACAATCGG TGCAGAATGC GGTATTCGAG
CAGAAAGATC CGTTGCTGAT CTACAAATTC GAGTCGGTTG AGCTGTTCAA ACGCTTCCTG
AGCAAGGTAA ACTTTGATAT GATCTCGTTC TTGATGAAGG CCGATATCCC ACAGGAGGAA
GCAGCGCCGC CGACCGCAGT ACCGCAGCAG GTGCGCCGCC CTGAGCCAGC GCCCGAGCTG
CACACCAACC GTGAGGAGGA TTACGACATT GAAACCGATA CTTTCCATTC ACAGGAGCCT
GCTACCAAAG CGCAGCCGGT GCGCACGATC AAAATCGCCG ACCGTAACCA GCGCGTGTCC
GTTCAGTATC GTGACGGCCG CATTGTACGC GATGTGAAGT TCAAAAAAGT GGAGCAGGAG
ATCAAAAACG GCGATTGCGT GGTGATCGAC GTGCATGAAG ACTAG
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| Protein sequence | MFKIFSKLFG TKSERDLKEL TPYVEKVNAE YALLASLSND ELRAQSANLK QHIAEQLKSV
DEQIAASRQQ AADEPNVDSK EAIFKKIDAL ELERNKELEK VLLDILPKAF AIVKDTARRF
TENDKLEVSA NAFDHELASK KANVTINGDK AYWNTTWDVI GQPIKWNMVH YDVQLIGGVV
LHQGKISEMA TGEGKTLVAT LPSFLNALAG QGVHIVTVND YLAKRDAEWN APLFEFHGMS
VDCIDRHQPN TIARRNAYKA DLTYGTNNEF GFDYLRDNMS RTPEELVQRK HHFAMVDEVD
SVLIDDARTP LIISGPVPRG DEQEFLELKP RVSRIVEAQK RLAMDFLNDA KKKIQAGDKK
EGGLALFRAH RGMPKYKPLI KYLSEGGIKA IMQESESIYL AENQKLMPQA DAPLYFTIDE
RHNSIELTEK GIDFLTGESE ETNFFILPDI AVDLDAIEKD PSLNEHDRVI AKEALIRDYS
VKTARIHTVN QLLKAFTLFE KDVEYVIMDG KVKIVDEQTG RIMEGRRYSD GLHQAIEAKE
SVRVEDATQT YATVTLQNYF RMYHKLAGMT GTAETEAGEF WEIYKLDVVT IPTNRGIVRK
DQEDKVYRSV REKYNAVTDE IVELVEAGRP VLVGTTSVEN SEIISRMLTL RKIPHQVLNA
KQHQREAEVV AEAGKPGTVT IATNMAGRGT DIKLTPEAKA AGGLAIIGTE RHESRRVDRQ
LRGRSGRQGD PGSSQFFVSL EDNLMRLFGS DRMAKVMDRM GLEEGEVIQS SMITKSIERA
QKKVEENNFG MRKRLLEYDD VMNYQRDAIY TRRRNALFGD RLAVDIANTL FDVCDEIATT
AGSYAELELA AITTLGMEVP FTENEYAALK PADRSQKLYD AAEKQYQDKN DAISGKALPV
LRSIYAERGA MISEIMIPFS DGIRQAGVVV GLQKAIESEG KDITREMEKA IVLSLIDQEW
KEHLREMDDL KQSVQNAVFE QKDPLLIYKF ESVELFKRFL SKVNFDMISF LMKADIPQEE
AAPPTAVPQQ VRRPEPAPEL HTNREEDYDI ETDTFHSQEP ATKAQPVRTI KIADRNQRVS
VQYRDGRIVR DVKFKKVEQE IKNGDCVVID VHED
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