| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3551 |
|---|
| Symbol | |
|---|
| ID | 8227136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4343539 |
|---|
| End bp | 4344654 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644931386 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003087924 |
|---|
| Protein GI | 255037303 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.185108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAT CCAAGAAAAG AATCCTCTTT TTTACGCCTT ATGCCACACG GACAGGATCA
GAAATGATGC TGTTATACAT TTTGAAAAAA CTAGACCGCT CGAGGTTCGA CGCCGGTATC
GTCAGCTTTG CGAACGGAGA ATTGCTTACC GAATTTCCCC AGGACATTCC CGTCCACATT
GCCCCGCGCA AATTCAATAC GATCGAGAAA ATTTCCTTTC ACCTCGGCAT AAATCCCACA
CTCCGCGCGC TTCGGAAGCT GGCCAAAAGT TTCAAGGCGG ATATTTGGTA CGTGAATACG
ACCATGATCC CCGAGACGAT CGTGGTGGCG AAAGAGTTCG GGATTAAAGT CATTACCCAT
TTTCACGAAA TGCCGCTCAC GTACGCATAC CTGAGCGCGC CCGATTTCAA AAGCATTGTG
GACTACTCGG AGCTGCTGAT CGGCTGCTCG CAAACTACCT GTGATTCATT GAAAGATGCA
GGTGGAAAAA ATGTCGGGTT ACTTTACTCA TTCATAGATC CTTCTCTCGT AAAAAAAGAC
GATAATCGCT CCGCAGAACT CCGGCGGAAG CTCGGCATTC CGGCCGATGC GTTTGTGTGG
ATACTCTCAG GAATGACTTC CGAGCGGAAA GGTTTCGATA TGCTGCCCGA TATCGCGGCG
GAAGTGAACG ATCCGCGCGT ACATCTGGTG TGGGTCGGTG CAACGATCGA CGACGGATTG
GTGTATTACA CGGAGCAGCG CTGCGCAAAT AACCGGTCGG CGACTAAAAT TCACCTCGTG
GGTAAGCAAA AAGAGGATTA TTATGCCTAC CTTAATATGG GAAATGGTTT TCTGCTCACC
TCGCGGCAAG ACCCGTTTCC GCTGGTGATG ATAGAGGCTG CGCTGCTTGG TAAACCCATT
GTCGCTTTCC CTTCCGGGGG TGTTTCCGAG TTTGTTCAAG ATGGAATGGG CGTTGTGACC
GGCGACCTGA GCGTCGGGCA GATGGTTGCG GCCATGCGTG CTGTTATGAG TGGGGAAACC
CCGACTGACA GCTCCCGGAG CTTCGAAAGG GCAAGCCGGT TCAATGTGGA AAACGGATAT
AATGAGTGGA TCGAATTAAT TGACAAAACC CGTTAG
|
|---|
| Protein sequence | MNQSKKRILF FTPYATRTGS EMMLLYILKK LDRSRFDAGI VSFANGELLT EFPQDIPVHI
APRKFNTIEK ISFHLGINPT LRALRKLAKS FKADIWYVNT TMIPETIVVA KEFGIKVITH
FHEMPLTYAY LSAPDFKSIV DYSELLIGCS QTTCDSLKDA GGKNVGLLYS FIDPSLVKKD
DNRSAELRRK LGIPADAFVW ILSGMTSERK GFDMLPDIAA EVNDPRVHLV WVGATIDDGL
VYYTEQRCAN NRSATKIHLV GKQKEDYYAY LNMGNGFLLT SRQDPFPLVM IEAALLGKPI
VAFPSGGVSE FVQDGMGVVT GDLSVGQMVA AMRAVMSGET PTDSSRSFER ASRFNVENGY
NEWIELIDKT R
|
|---|
| |