Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3469 |
Symbol | |
ID | 8227053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4244542 |
End bp | 4245570 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644931305 |
Product | cytochrome oxidase assembly |
Protein accession | YP_003087844 |
Protein GI | 255037223 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0691461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTT CAAAACACAT CATTGATCTT AAAGCGAATC GCCGGTTCCG GCGATTCGCT TTAAATACAC TCATTTCGCT GTACCTGGTC GTAGTAGCAG GCGGCGTCGT GAGAAGTACA GGCTCAGGAA TGGGCTGTCC CGACTGGCCT AAATGCTTCG GCAGATGGGT CCCTCCTACC GAAGCATCAC AACTTCCTGC CAATTACAAG GAGATTTACG GTGCCAAGCT CAAAGGAGAA GTCGAGTTTA ATGCGACGAA AACCTGGACC GAGTACGTAA ACAGGCTTGT AGGAGCGATC ACGGGCATCA TCATTTTTCT GATGCTGCTG GCCTCCATTC CTTTCCTTAA ATCCGGAAAC AAGCAGATAT TCTTTTGGAG CCTCGGGGCT TTCCTGCTGA CGGGCTTCCA GGGTTGGCTC GGTGCGAAAG TAGTTTCTTT CGAATTGCAC CCGCTGATCG TCACAGTACA CATGCTGCTC GCCATAGTGA TCATCTTCAT CGTGCTCTAC GTGTTTACGT GGGCCGGCTA TGTCGAAAAA GTAATCACGC TGCGTGAAGG CAGCGAAAAA GTGCTCAGTG GAATCGGGAT CGCGGTTATG GCGCTCTCGT TATTCCAGAT CCTGCTCGGA ACGCAGGTCC GTGAAGCGAT GGACGTAGTG ATCATGAGGC TCGGATACGG GGCACGGTCA CAGTGGATCG ACGAACTGGG AGCGAACTTT TACATTCACC GCTCGTTTTC AATACTGGTA TTCGTGGTGA ATGCAATATG GATCAACCGG ATTTTGAAAT CCGGAAACAA GGGAACAGTA GCAGGTAAGA TTGCAATGGC CTGTCTCTGG ATCCTGATCG CGGAAATAGC AACAGGCATC ATCATGGCGT ATTTCGGGGT TCCCGCATTT GCCCAGCCGA TCCACCTGAC GTTCGCGATA CTGCTCATCG GTCTGCAATT CATTGTATGG CTGGTGGTGA ATGGCAAGAA GTATTTAAAG TACAAAGGCG TGGCCGCGAC GGCTGGTAGC CAGTTTTAA
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Protein sequence | MTSSKHIIDL KANRRFRRFA LNTLISLYLV VVAGGVVRST GSGMGCPDWP KCFGRWVPPT EASQLPANYK EIYGAKLKGE VEFNATKTWT EYVNRLVGAI TGIIIFLMLL ASIPFLKSGN KQIFFWSLGA FLLTGFQGWL GAKVVSFELH PLIVTVHMLL AIVIIFIVLY VFTWAGYVEK VITLREGSEK VLSGIGIAVM ALSLFQILLG TQVREAMDVV IMRLGYGARS QWIDELGANF YIHRSFSILV FVVNAIWINR ILKSGNKGTV AGKIAMACLW ILIAEIATGI IMAYFGVPAF AQPIHLTFAI LLIGLQFIVW LVVNGKKYLK YKGVAATAGS QF
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