Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3461 |
Symbol | |
ID | 8227045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4237793 |
End bp | 4240315 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931297 |
Product | hypothetical protein |
Protein accession | YP_003087836 |
Protein GI | 255037215 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00828066 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCCGTT TCTTTCTCTG TTTTGCCTTG CTGTTATGCC AATTCGTCAA TGCAAATGCA CAAGGCATTT CCACTGCCAA GCCATGGACG TACTGGTGGT GGATGGGCAG CGCCGTGAAC AAGGCCGACA TTACCGCCCA GCTCGAATAT TTCAGCAAAT CGGGTGTCGG TGGCGTGCAT ATCATTCCCA TTTATGGTGT GAAAGGCTAT GAAAAGGAAA ACATCTCCTA CCTCACCCCG CAATGGCTGG AAATAATGCA GCACACCATC GGTGAGGGTA AGCGGCTTGG GCTCGGTGTG GACATGACCA CCGGCACCGG CTGGCCTTTC GGCGGGCCGA ATGTAACGCC TGCCATGGCC GCACAAACGA TGACGGTCGT AGACGGAAAG CCATCGGTAA AACCAACCGG GCAGAAGGTA AAACGCGCGG CGCCGGGAGG CGAAGGTTTT GTACTCGATC CGTTCAATGC GGCGGGCATG CAGCAATACC TTTCCCGCTT CGTTTCCGCA TTTGCCAAGT CAGCGGAAAA ACCGCGCTCA ATGTACAACG ATTCCTACGA AGCGTACGGC GCGAATTGGA CGGCGGATTT CGCGGCGCAG TTCCAGTCGC GGAGGAAGTA TGATTTGCTG CCCAAATTGG CCCTGCTAGC CGACTCCACC GGAAACGCCG AAGCTACATT AGTCAAAATA GATTATCACC AGACGCTCGC TGAGCTGCTT CTCGAACGCT ATGCCCGTCC GTGGACCGAT TGGAGCCGCC AGCACGGCTT TGTGACGCGC TACCAGGCGC ACGGATCGCC GGGTAACCTG CTCGATCTGT ACGAGGCTGC GGATATTCCA GAAACCGAGT CGTTCGGGAC CAGCCGCTTC GATATTCCCG GTTTGCGTAT CGATCCCGAT TATTCGATCG ACCAGTTCGG TACGCCGAAT CCGCTGGCGA TGAAATTCGC TTCGTCAGCG GCGCATTTGT CGGGCAAAAA GCTCGTGAGC TCCGAAACCG GCACCTGGCT GGCGAATCAT TTTAAAGTGT CGCTTTCACA GGTGAAGCCG CAGATCGACG AGCTTTTTAC GGCGGGTATC AACCACATTT TTTACCACGG TTCTACTTAT TCGCCTGAAA AGGAAGCTTT CCCCGGCTGG CTGTTCTACG CCTCGACGAA TTTTGGCAAA AGCTCGCATT TCTCTGAGCA TTTCCCGCTG CTCAATGCCT ATGTGGAATG GTGCCAGCGA TTGTTGCAGG GCAGCAAGCC GGACAACGAC GTGCTCGTTT ACTTCCCGAT CCACGATTTG TGGGCTACCA AAGCGAGATC CGGAGGCGGG GTGCATTTGC TGGAAGTACA CCACGTGGAT CGATGGCTGC TCGATTTGCC GTTCGGGAAG CTGTCGGAAA GGCTGTGGAA AGAAGGCTAT GCATTCGATT TTGTGTCGGA TTTGCAATTG AAAAAGCTGT CGGCAGGGAA TGACGGCACA TTAAATTCCG GAAGCGCCAT TTACAAGACT TTGGTGATTC CTTCGGCGAC CTATCTGCCC GAAGAAACAT TGAAAGAGCT GGAACGACTT GCGAATGCAG GTGCGAAAAT CGTTTTCGAG CAGCAACTGC CCAAGACTGT TACCGGCCAT GCGGACCACG CGCAGCGGCA GAAGTCGTTT GTTGAAAGCC TGAGCACATT GTCAAAGAAA AGTAATGTGA AGGTTTCCAA TGACCTGAAT GCCGATCTGG CTGAAAATGG CGTGATAAGG GAGCAACTGG CAGAAAAAGG ACTCACATTC ATTCGGAAGA AGGATGCAAA TGGCTCGCCG CTATATTTTG TAGCTAACCT GGGGAATACC ATTCAGTACG GCTGGGTGCG CATCGGGGAG GGAAAAACGA TGTCCAGAAA TTCACCGTTG CGAGGGGAGT CGCTAATGAG CATTCGGACC TTGAATGGGC ACGATGAGGT TTTCTTAGAC CTACACCCCG GAGAATCTTG CTTCCTGGAA GGTGCGGCAG ATGGTTCTGA CTTGCCTTTC TCGACTACTT CAAAAAAGGA ACTGGAGATA AAAGGCAATT GGGAGGTTAC ATTTCTATCA GGAAAACCTT CACTACCCGC TCCCGCAAAA CTGTCCACGC TTCAATCCTG GACGACACTA CGCGATTCCG CAGAATACTT TTCAGGAAAG GCGCGCTATC GGATCACATT TGACCTGAAA GGTTCATTGA AGCAATACGA AGGCGCAGGA ATCAGTTTGG GCGACGTCCG CGAAGTAGCG AGCGTAAAAC TGAACGGCAA AGACCTCGGC ACCGCCTGGC ATATACCTTT CCGCTTACAT GCCGGGCATG CATTAAAAGC GAAAGGCAAT GTGCTCGAAA TTGAAGTCAC CAATCTTTCA GCCAACTACA TGCGTCTCCG CGACCAGCAG CAGCCTGATT GGAAGAAATT TTACGATATC AACATCGTGG ACATTACTTA TAAAAAGTTC GACGCCACGC GCTGGCAACC GATGCCGTCC GGCCTGCTGG GCCCGGTAAA GTTGGTTTAT TGA
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Protein sequence | MRRFFLCFAL LLCQFVNANA QGISTAKPWT YWWWMGSAVN KADITAQLEY FSKSGVGGVH IIPIYGVKGY EKENISYLTP QWLEIMQHTI GEGKRLGLGV DMTTGTGWPF GGPNVTPAMA AQTMTVVDGK PSVKPTGQKV KRAAPGGEGF VLDPFNAAGM QQYLSRFVSA FAKSAEKPRS MYNDSYEAYG ANWTADFAAQ FQSRRKYDLL PKLALLADST GNAEATLVKI DYHQTLAELL LERYARPWTD WSRQHGFVTR YQAHGSPGNL LDLYEAADIP ETESFGTSRF DIPGLRIDPD YSIDQFGTPN PLAMKFASSA AHLSGKKLVS SETGTWLANH FKVSLSQVKP QIDELFTAGI NHIFYHGSTY SPEKEAFPGW LFYASTNFGK SSHFSEHFPL LNAYVEWCQR LLQGSKPDND VLVYFPIHDL WATKARSGGG VHLLEVHHVD RWLLDLPFGK LSERLWKEGY AFDFVSDLQL KKLSAGNDGT LNSGSAIYKT LVIPSATYLP EETLKELERL ANAGAKIVFE QQLPKTVTGH ADHAQRQKSF VESLSTLSKK SNVKVSNDLN ADLAENGVIR EQLAEKGLTF IRKKDANGSP LYFVANLGNT IQYGWVRIGE GKTMSRNSPL RGESLMSIRT LNGHDEVFLD LHPGESCFLE GAADGSDLPF STTSKKELEI KGNWEVTFLS GKPSLPAPAK LSTLQSWTTL RDSAEYFSGK ARYRITFDLK GSLKQYEGAG ISLGDVREVA SVKLNGKDLG TAWHIPFRLH AGHALKAKGN VLEIEVTNLS ANYMRLRDQQ QPDWKKFYDI NIVDITYKKF DATRWQPMPS GLLGPVKLVY
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