Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3421 |
Symbol | |
ID | 8227000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4181559 |
End bp | 4182821 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931252 |
Product | ornithine aminotransferase |
Protein accession | YP_003087796 |
Protein GI | 255037175 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000373729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACT ATACAGACAC AACCGATATC AGCCCCTCCC AACACGCCAT AGACCTCGAA TACCGCTACG GTGCGCATAA CTACAAACCG ATGCCGGTAG TGATCGAGCG GGGGGAAGGA GTTTTTTTGT GGGATGTGGA AGGGAAGCAG TATTTCGACT TTCTCTCGGC GTATAGTGCG GTGAGCCAGG GGCATTGCCA TCCGAAAATC GTGAATGCGA TGATCCAACA GGCACAGAAG CTGACGCTCA CTTCGCGGGC ATTTTACAAC GACCGCTTAG GCGAATCCGA GAAGTTCCTG TGCGAATATT TCGGGTACGA TAAGGTGCTG ATGATGAATT CCGGCGTGGA AGGCGGTGAA ACGGCATTGA AACTGACCCG CAAATGGGCG TATAAAGTAA AGGGTATCGA ACCCGGAAAG GCCAAGACAG TGTACGCGGC CGGTAATTTC TGGGGTAGGA CACTGGCGGC GATTTCTTCG TCCACAGATC CTTCTTCCAC CAACGACTAC GGCCCCTTCC TGCCCGGCTA CGAGATCATT CCCTACAACG ACCTCGGCGC ACTCGAAAAC CTGCTGAAAA GCGATCCGAA TATCGCCGGT TTTATGGTAG AGCCCATTCA GGGTGAAGCG GGCGTGGTGG TGCCGGACGC GGGTTACCTG AAAGGCGTGC GGGAGTTGTG TACAAAATAC AATGTCCTTT TTATCGCCGA CGAGGTGCAA ACCGGCATCG GGCGCACGGG CAAGCGCCTG GCGTGCGACT GGGAGGGCGT GAAACCCGAT ATTCTCGTAC TCGGAAAAGC ATTGTCGGGC GGTACCATGC CCGTTTCGGC TGCGCTTGCC GACGACGAGG TGATGCTCAC GATCGCTCCG GGCGAGCACG GTTCTACCTA CGGCGGAAAC CCGCTGGCGT GCGCGGTGAC GATTGCTGCC TTGCAGGTGG TGCAGGACGA AAACCTGGCC GAAAATGCCG AACAAATGGG CCGGATCTTC CGGCACAGAA TGCAGGATCT TCAAAAGCAA TGTTCTCTCA TCGAAAGCGT TAGAGGGAAG GGGCTGCTCA ATGCGATCGT GATCGACGAC ACCGAGGAAA GCAGCACAGC AATGGACCTT TGCTACAAAA TGATGGAAAA AGGATTGTTG TGCAAGCCTA CACATGGCAA TAAAATCCGC TTCGCGCCGC CGTTGGTGAT CGATGAGGCG CAAATGGACC ATGCCTGCCG GATCATTGAA GAGGTGTTTT TAGAAATGAA TGGAGATTTA TGA
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Protein sequence | MPDYTDTTDI SPSQHAIDLE YRYGAHNYKP MPVVIERGEG VFLWDVEGKQ YFDFLSAYSA VSQGHCHPKI VNAMIQQAQK LTLTSRAFYN DRLGESEKFL CEYFGYDKVL MMNSGVEGGE TALKLTRKWA YKVKGIEPGK AKTVYAAGNF WGRTLAAISS STDPSSTNDY GPFLPGYEII PYNDLGALEN LLKSDPNIAG FMVEPIQGEA GVVVPDAGYL KGVRELCTKY NVLFIADEVQ TGIGRTGKRL ACDWEGVKPD ILVLGKALSG GTMPVSAALA DDEVMLTIAP GEHGSTYGGN PLACAVTIAA LQVVQDENLA ENAEQMGRIF RHRMQDLQKQ CSLIESVRGK GLLNAIVIDD TEESSTAMDL CYKMMEKGLL CKPTHGNKIR FAPPLVIDEA QMDHACRIIE EVFLEMNGDL
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