| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3381 |
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| Symbol | |
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| ID | 8226960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4136881 |
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| End bp | 4138401 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931212 |
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| Product | TonB family protein |
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| Protein accession | YP_003087756 |
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| Protein GI | 255037135 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAT TACTTTACAT CGGCAAGGTG AGCCTATACT GGACGTTGCT ATACGGCTGC
TACTGGCTGA TGCTGCGCAA GCACACCTTC TTCCAGTGGA ACCGCGCCTA TCTGGTCGCC
TCGCTGCTCG CAGCATTCCT GCTTCCCGAG GTGATTTATC CGGCATCGGG GCCGGAGCTG
CCGGTTATTT ACGAGGTCAA TGCCGCTGCG TTCACCGTGT CGGCCGCGCC CAGGGAGCCG
GCGAGCGGAT TTAACTGGTG GCAGGGAATT GCGATCGTTT ACGCATTCGG GCTGGCGATC
TTCGGTTCGC AGCTTATCCG CGAAGTCGCA AAGCTGGTAC GGTACCTGAA ATCGGGGGAA
GTGATCGGCC TTGAAGATTG CACGATCGTC CTCATCGATT CGAACCAGGT AGGCTCGTTT
TCCTTCCTGA AATGGATTGT CATCAACCGG AACGACTACG AAAATCACTT CGACGCGATA
TTAAGGCATG AAATGGTGCA CACGCACCAG CGCCACAGCC TCGACATCCT GCTCGTGGAG
GTGCTCCGGA CCCTATTCTG GTTTCACCCG GTGCTGCCGC TGTACAAACG CTCCTTGCAG
GAAATCCACG AGTACCTGGC CGATGCCGAG GCGCCGAATC GCGAGCATTA TGCCAAATTT
CTCGTTGCCT ACGCCCTCAA TGCGCCCGTG GCTGCGCTCA CGAACCATTT TTTCAAACCA
TCCCAAATTA AAAATCGGAT CAAGATGATT TACAAAAGCA GAACTTCGAA GTGGATGCTC
GGCACGTACG CCGTGGCAGC CGCGCTGATT GGCAGTGTTG CAGTATTCGT TGCCGGTTGC
GAGAGCCAGG TTTCCAAGGA AACGGAACCA CCCAAAGTGG AGCAAAAAGA AGCAGTGGTA
GTGCCCGACG AGGCAGTGAA AGACGAAAAA GTTTATACTG TGGTCGACAA GCATCCCCTG
TTTCCGGGAG GCGTCAAAGA GATGTACAAG TTTCTCGGAC AAAATATCAG ATATCCTAAA
AAAGCGATCG ACGCGAATGT ACAAGGCCGG GTGTTTCTGG CATTCGTGGT GACGGAAACC
GGCGAGATCA GCGACCTCCG CATTCTGAAA GGATTGGGCG CTGGCTGTGA CGAAGAGGCA
CTGAGGGTCG TTTCGACGAT GCCCAAATGG GTACCCGGCG AGGTCGACGG CAAGCCGGTT
CGTGTTAAAT ATAACTTGCC GATCAATTTC CAGCTGGAAG AAACGCCTTC TAACGACACG
ACGCAGGCTA CTGTGCCGGG CGTTGCTAAA TCCCCAACAA AAGTTACGTT GCGCCTGAAC
GACCAGCTGA CGCTGCCCGG TTCGCAACCG CTTTACATCC TGAACGGTGA GGAAATGGAA
GAAGGCCTAT CACTTAATAC GATTGATCCC AACACCATCG AGAGCCTCAA CGTTTTCAAA
GGCGCGGAGG CGACGAAAAT CTACGGTTCG AAGGGCGCAA ACGGTGTCAT CTCCATCATT
ACCAAAGACA ATAACAAATA A
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| Protein sequence | METLLYIGKV SLYWTLLYGC YWLMLRKHTF FQWNRAYLVA SLLAAFLLPE VIYPASGPEL
PVIYEVNAAA FTVSAAPREP ASGFNWWQGI AIVYAFGLAI FGSQLIREVA KLVRYLKSGE
VIGLEDCTIV LIDSNQVGSF SFLKWIVINR NDYENHFDAI LRHEMVHTHQ RHSLDILLVE
VLRTLFWFHP VLPLYKRSLQ EIHEYLADAE APNREHYAKF LVAYALNAPV AALTNHFFKP
SQIKNRIKMI YKSRTSKWML GTYAVAAALI GSVAVFVAGC ESQVSKETEP PKVEQKEAVV
VPDEAVKDEK VYTVVDKHPL FPGGVKEMYK FLGQNIRYPK KAIDANVQGR VFLAFVVTET
GEISDLRILK GLGAGCDEEA LRVVSTMPKW VPGEVDGKPV RVKYNLPINF QLEETPSNDT
TQATVPGVAK SPTKVTLRLN DQLTLPGSQP LYILNGEEME EGLSLNTIDP NTIESLNVFK
GAEATKIYGS KGANGVISII TKDNNK
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