Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3180 |
Symbol | |
ID | 8226755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3889589 |
End bp | 3891025 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644931010 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003087558 |
Protein GI | 255036937 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.882146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACCC CGGAATATGA TGCGGTGGTG GTCGGCTCGG GCCCGAACGG GCTTGCAGCG GCTATTACGT TGCAGGAAGC GGGGCTGTCG GTGCTGGTGG TGGAAGGCAA GGATACGATC GGCGGCGGAA TGCGTACTGC TGAACTAACG TTGCCTGGTT TTCGCCACGA TATCTGTTCG GCTGTTCACC CGATGGCGCT AATGTCGCCG TTTTTCGCCC GGTTACCGCT CGCCGATTTT GGATTGCGGT TTGTACAGCC GACGCACGAC GCGGCCCACC CGCTGGATGG CGGAAGGGTA GCGGTGCTCG ACCAGTCGGT AGAATCGACG GCCCGACAGT TGGGTGCCGA CGGCGACACC TACCGCAAGT GGATGGGCAG CCTGCTCGAC TCCATTCCAA AACTGCTGCC GGCATTGCTG GGCCCGCTCC AATGGCCAGA AGAGCCATTC CGGCTGGCGG GATTCGGATT GCAGGCATTG CCGCCGGCGA CATGGACAGC GGCACGGTTC AAAACCGCGG AAGGACGTGC ATTGTGGGCC GGAATGGCCG CACATTCGAT CCAGCCGCTT GGCAACCTCG CAACGTCGGC ATTTGGCATC ATGCTCATGG CGGCAGCGCA TATTAAAGGC TGGGTGATCC CCGTGGGCGG TAGCCAAAGT ATTGCCGACG CACTCGCCGC CTATTTCCGG TCACTTGGCG GGGAAATCCG GACAGGCTGG ATGGTGGCCT CGGCGGATGA GCTGCCGTCG TCGAAAGTGA TACTGATGGA CGTAACGCCC AGGCAACTGG TCCGCATTGC GGGCAGCAGG CTGAGTTCGT CGTACAAGCG CCGGCTCGGA ACCTACCGGC AGGGTCCGGG GATATTTAAG GTGGATTGGG CATTAAACGA GCCGATCCCG TTCCAGCGCG AGGAATGCCG GGGAGCCGGC ACGGTGCATC TGGGCAACAC ATTTGAAGAA ATTGTGCGGT ACGAACGCAA TGTAGGAAAC GGTAAGCGCG GCGAAAAGCC ATTCGCATTG GTAGCGCAGC AAAGTGTTTT TGACAAAACC CGCGCACCCG AAGGCAAACA TACCGCCTGG GCTTACTGCC ACGTGCCCAA CGGCGACGAC CGCGATATGA CCGACGCCCT GGAAAGCCAG ATCGAGCGGT ATGCGCCCGG TTTCAGGGAT GTGATCCTGG CAAAGCATGC CACCAATGCC AGCGCTTTTG AACAATATAA TCCAAACTAT ATCGGCGGCG ACATTAACGG CGGTATTCAG GATATTTGGC AATTGTATTC ACGTCCGGTG GTGAGTGTCT CGCCTTACCG GACGTCGGCG GACGACATTT ACATCTGCTC ATCGTCCACA CCTCCGGGCG GGGGCGTGCA TGGCATGTGC GGGTACCACG CGGCCCGGCA GGCATTGAAG GACGTTTTTA AAGTTAAAAT AGGGTAA
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Protein sequence | MKTPEYDAVV VGSGPNGLAA AITLQEAGLS VLVVEGKDTI GGGMRTAELT LPGFRHDICS AVHPMALMSP FFARLPLADF GLRFVQPTHD AAHPLDGGRV AVLDQSVEST ARQLGADGDT YRKWMGSLLD SIPKLLPALL GPLQWPEEPF RLAGFGLQAL PPATWTAARF KTAEGRALWA GMAAHSIQPL GNLATSAFGI MLMAAAHIKG WVIPVGGSQS IADALAAYFR SLGGEIRTGW MVASADELPS SKVILMDVTP RQLVRIAGSR LSSSYKRRLG TYRQGPGIFK VDWALNEPIP FQREECRGAG TVHLGNTFEE IVRYERNVGN GKRGEKPFAL VAQQSVFDKT RAPEGKHTAW AYCHVPNGDD RDMTDALESQ IERYAPGFRD VILAKHATNA SAFEQYNPNY IGGDINGGIQ DIWQLYSRPV VSVSPYRTSA DDIYICSSST PPGGGVHGMC GYHAARQALK DVFKVKIG
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