Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3174 |
Symbol | |
ID | 8226749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3883990 |
End bp | 3884841 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931004 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003087552 |
Protein GI | 255036931 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TCGGATTTAA TGTGCTGGCC TGGACGGCGG CAGTTTCGGA TGACCTGTTT CCGATCATCG AAAGACTGAA AACGATTGGT TACGACGGTG CCGAGTTTTA TTTAGGACCC CAGGAAGCAG CGGCTTACCA GCGAATGGGC AGTTTTGTAA AAGACCTGGG TCTTGAAACC ACCGCGGTAA TGACGCTCGG AGCCGATGAA AACCCGGTAA GCGACTCGAT TGAAGTTCGG CAGAAAGCGC TGGACAAGAT CAAATGGGCG GTGGACCGCG CGCATGATCT CAATTCAAAA GTGATTTGCG GGCCGTTCCA TTCGGCGCAC ACGGTGTTTG TGAACCGCCC CGCCGAAGAC CGGGAATATG CATTGGCCGG CGAAGTGCTG AATGCCGCCG CTGAGTATGC CGCACAAGCT AACATCACCT TTGCATTGGA AGCGCTCAAC CGGTTTGAAT GCTATTTGTG CAATACCATG GAGCAGCTGC TCAAACTCGT GAAAGCCGCC GACCATCCCA ACGTGCGGGC GATGTTTGAC ACGCACCATT CCAATATCGA GGAAAAAAGC TATCTGAACG GATTGCAGAC GATCCAGCCA GTCCTCGCGC ACGTGCACAT CAGCGAAAAT GACCGCGGTA CGCCGGGCAC AGGCCAGGTG AAATGGGACG ACGCATTTGC TGCCTTGGCA GCGATCAAAT ATGACGGCTG GCTGACGATC GAGGCATTTT CACGCAACGA TCCGGGCTTT GCGAATGCGA TCGGCGTTTG GCGGGAGTTT AACGAGCCGT GGGACATTGC GGAAAACGGC TACAAATTCA TCCGCGAAAT GAGCCTGAAA CACGGGCTCT GA
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Protein sequence | MNKIGFNVLA WTAAVSDDLF PIIERLKTIG YDGAEFYLGP QEAAAYQRMG SFVKDLGLET TAVMTLGADE NPVSDSIEVR QKALDKIKWA VDRAHDLNSK VICGPFHSAH TVFVNRPAED REYALAGEVL NAAAEYAAQA NITFALEALN RFECYLCNTM EQLLKLVKAA DHPNVRAMFD THHSNIEEKS YLNGLQTIQP VLAHVHISEN DRGTPGTGQV KWDDAFAALA AIKYDGWLTI EAFSRNDPGF ANAIGVWREF NEPWDIAENG YKFIREMSLK HGL
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