Gene Dfer_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3171 
Symbol 
ID8226746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3881079 
End bp3881891 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content54% 
IMG OID644931001 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003087549 
Protein GI255036928 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA TCAAAACCAA CGGTATCAAC TTTTATTACG AAGAACGCGG TTCTGGCGAG 
CCTTTGTTGC TTATTATGGG CATCACGGCG CCGGGTGCTG TGTGGAATGT GCACGTGGCT
GACTGGAAGC ATCATTTTCG GTGCATTATC GGCGATAACC GCGGCGTGGG GCTTACCGAC
AAGCCGGCCG GGCCGTATTC AACCGAGCAA ATGGCGGATG ACTATGCCGG TTTGCTGGAT
TCTTTGGAAT TGGAGAATGC GCATGTGGTA GGATGCTCAA TGGGCAGCAC CATTGCCCAG
CAGCTCGCGA TCCGGCATCC GAAAAAGGTG AAATCGCTGG TACTAATGTG CCCCTGGGCG
CGCTGCGACA ATTATGCAAA AGGGCTTTTC CAGCATATTA TGAATGCCAA GGCGCGTTTC
CGGCCGGAGG AATTCAGCCT GTACATTCAG TTGCTGATCT TTTCAAAATC GTCGTGGGAC
GATGCGAAAC AGCATGAAGA CCTGGAAAAC GGGCGCCGGA TTGACGCGTT TAATCCGTTT
CCGCAGCCGC TGCACGGGCT CGAAGGGCAG GCCGCGGCTT GCATTAATCA CAATGCATTG
CCCGATTTGG GCCAGATCAA TGCGCCAACA TTGGTGATAG GGGGTAAAGA AGACATTTTT
ACGCCGGTAT GGATGGCCGA AGAGGTCGCA GGCGGCATTC CGGGTGCTGA GCTGCACTTG
TACGATAAGC TCGGGCACGC ATTCCATTTT GAAAATACCG AAGATTTCAA TGCCCGTGTG
AGGAACTGGC TGAGCCGCGT GCCGGTGGCC TGA
 
Protein sequence
MPTIKTNGIN FYYEERGSGE PLLLIMGITA PGAVWNVHVA DWKHHFRCII GDNRGVGLTD 
KPAGPYSTEQ MADDYAGLLD SLELENAHVV GCSMGSTIAQ QLAIRHPKKV KSLVLMCPWA
RCDNYAKGLF QHIMNAKARF RPEEFSLYIQ LLIFSKSSWD DAKQHEDLEN GRRIDAFNPF
PQPLHGLEGQ AAACINHNAL PDLGQINAPT LVIGGKEDIF TPVWMAEEVA GGIPGAELHL
YDKLGHAFHF ENTEDFNARV RNWLSRVPVA