Gene Dfer_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3124 
Symbol 
ID8226699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3812599 
End bp3813690 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content40% 
IMG OID644930955 
Productprotein of unknown function DUF450 
Protein accessionYP_003087503 
Protein GI255036882 
COG category[S] Function unknown 
COG ID[COG4748] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.579922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.419432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA AAGATCAAAT TAAACAGTTC AGTGAGCGCG TAAGTAAACT AAGGGACAGC 
ATCCATACGG AAGAGGCCAC GAAGAACGCA TTCATAATGC CATTCCTTCA AATTTTGGGG
TACGATGTAT TTAATCCATT AGAAGTGGTT CCCGAATTCA TATGCGATAT CGGCATTAAG
AAGGGTGAGA AAATTGACTA TGCGATTTTT AGAGACGGAT CTCCCATAAT TCTTGTTGAA
TGCAAGCACT GGAAGCAAAA ACTGGATGTT CATGACGGTC AGCTACTAAG GTACTTTCAT
GTTTCCAAAG CGAAATTTTC AATACTAACT AATGGTACAG TCTTTCGATT TTACACTGAC
TTAGTAGAAC CAAACAAAAT GGACGAAAAG CCATTTCTTG AATTCAATAT TGAAGAAATC
AAGGATGGAC AAATTGAGCA ACTTAAAGAA TTTCACAAAG CATACTTCGA CGTCGACAAT
ATCTATCAGT CTGCTAGTGA ATTAAAATAC ATAAATGAAA TTCGCCACCT AGTCACACAG
GAGTTCAACG AACCTAATGA CGAATTTGTG AAATATTTTG CGAGACAGGT GTATCCGTCC
GTAATGACGT CGAAAGTTGT AGATGCGTTC AGAGCACTCG TAAAAAGGAC AATCACAAAC
ATAATCAACG ATACAATTAA CGAACGACTG AAATCTGCCA TTGCGAAACA CGATGCACCA
ATCCAGGAAG AGCCCGCGCC AGGAACAATG ACCGTGGCAA ATAGCAGCCC AGGCAATCAG
GATAAGGAAA TCGTCACTAC CGACGAAGAG CTTGAAGGTT TTTACATCGT CCGCTCAATC
CTGCGCCCTA AGATTCCAGC GGCTCGGATT ACTCATCGGG ATGCACTTTC GTATTTTGCT
ATTTTTGTTG ACGACAATAA TCGGAAGCCT GTTTGTCGAC TATATTTGAA CAGTCCAACC
AAAAGGCACA TTGGCGTTTT CGACTCCGAC AAAAAAGAGA CGAAATTCGA GATCAAAACA
ATTGACGATA TCTACAATCA CTCAGAATCG CTAACTAAAA TTGTCGAATT GTATTTGGAC
ACTAAGAAAT GA
 
Protein sequence
MDFKDQIKQF SERVSKLRDS IHTEEATKNA FIMPFLQILG YDVFNPLEVV PEFICDIGIK 
KGEKIDYAIF RDGSPIILVE CKHWKQKLDV HDGQLLRYFH VSKAKFSILT NGTVFRFYTD
LVEPNKMDEK PFLEFNIEEI KDGQIEQLKE FHKAYFDVDN IYQSASELKY INEIRHLVTQ
EFNEPNDEFV KYFARQVYPS VMTSKVVDAF RALVKRTITN IINDTINERL KSAIAKHDAP
IQEEPAPGTM TVANSSPGNQ DKEIVTTDEE LEGFYIVRSI LRPKIPAARI THRDALSYFA
IFVDDNNRKP VCRLYLNSPT KRHIGVFDSD KKETKFEIKT IDDIYNHSES LTKIVELYLD
TKK