Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3121 |
Symbol | |
ID | 8226695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3809655 |
End bp | 3810890 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644930951 |
Product | GTP-binding proten HflX |
Protein accession | YP_003087500 |
Protein GI | 255036879 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.653968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGATA AGAAAAAATT ATATTCCACA GCCGCCAAAA AGGAAACCGC CGTACTGGTG GCTGTAAGTA CTCAGAAACA AAACGCCGAA AAGACAAAGG AATACCTGGA AGAACTCGCG TTCCTGGCTA CCACGCTGGG CGTGGAGACG GTCCAGACCT TTACGCAAAA TCTCGAACGG ACCGACATCC GGACGTACAC CGGGAAAGGC AAGCTCGAAG AAATCCTGAT TTACGTCACC GCCAATCCGG TGGACATGAT CATTTACGAC GACGACCTTA CCCCGTCGCA GGTCCGCAAC CTCGAGGCCG TTTTCAAGGA CATCAAGGTG ATCGACCGCA GCTTGCTCAT CCTCGCCATT TTCGCGATGC GCGCCCAAAC GGCCCAGGCG AAATTGCAGG TAGAACTCGC TCAGTACCAG TACATGTACC CGCGACTAAC CCGCTTGTGG ACGCACCTTA GCCGCCAGTC GGGCGCGGGT GTGGGGATGC GCGGACCAGG TGAAACCGAG CTCGAAACCG ACCGCCGGAT CGTGAAGGAC CGGATTGCGT TCCTGAAAGA AAAGCTCGAA AAAGTGGACA AACAGAGCGT AACCCGCCGA AAAGAGCGCG ACCGCCTCGT GCGCGTGGCC ATAGTGGGCT ACACCAACGT GGGTAAATCG ACCCTAATGC GTAACCTTTC GAAAGCCGAC GTCTTCGCCG AAAACAAACT CTTCGCAACC GTTGATTCAA CCGTGCGGAA AGTGAACATG GAGAATATCC CTTTCCTGCT CACGGACACC GTCGGGTTCA TCCGCAAGTT GCCCACGACG CTCATCGAAT CCTTCAAATC GACCCTCGAC GAGGTGCGCG AGGCGGATAT CCTGATGCAC GTGGTCGACA TTTCGCACGC ATCGTTTGAA GAGCACCTGG ACGTTGTGAA CAAAACACTC GAAGAGATCG GCGCAGCCAA CAAACCTTCA ATATTGGTTT TCAACAAGAT AGACCTTTAT AAACCTTCGT ACAACGACGA AGAAGAGGAA CAAGCCGCCG CGCCATCGAC CCAGGAAATA CTCGATCAGC TGAAACGCAG CTACATCGCC GAAAAAGCCG ACCACGTCGT TTTTATTTCC GCGCAAGAGA AAGAAAACAT CGACGAATTG AAGCGGACGC TATTCTCGCT GGTGAAAGAA AAACACTTCT CGATCTACCC GAACTGGCTC GACCTCGGTT ACACACCAGT AGAAACGGAG GAATAA
|
Protein sequence | MIDKKKLYST AAKKETAVLV AVSTQKQNAE KTKEYLEELA FLATTLGVET VQTFTQNLER TDIRTYTGKG KLEEILIYVT ANPVDMIIYD DDLTPSQVRN LEAVFKDIKV IDRSLLILAI FAMRAQTAQA KLQVELAQYQ YMYPRLTRLW THLSRQSGAG VGMRGPGETE LETDRRIVKD RIAFLKEKLE KVDKQSVTRR KERDRLVRVA IVGYTNVGKS TLMRNLSKAD VFAENKLFAT VDSTVRKVNM ENIPFLLTDT VGFIRKLPTT LIESFKSTLD EVREADILMH VVDISHASFE EHLDVVNKTL EEIGAANKPS ILVFNKIDLY KPSYNDEEEE QAAAPSTQEI LDQLKRSYIA EKADHVVFIS AQEKENIDEL KRTLFSLVKE KHFSIYPNWL DLGYTPVETE E
|
| |