| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3105 |
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| Symbol | |
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| ID | 8226679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3794310 |
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| End bp | 3795416 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930936 |
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| Product | 6-phosphogluconolactonase |
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| Protein accession | YP_003087485 |
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| Protein GI | 255036864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000219281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA GACTGATCTT ATCCATCCTA TTACTTTCCG CTGGTTTATC GGCATTCGCG
CAGGAGAGGA AGATTACTTT CTACGTGGGT ACGCAGGACA AAGGGGCCAA TTCTTCGATC
ACGCGCTGCG AACTGAACCT GGCATCCGGG CAGATCACGC TGATTGATAC GATCAACAAA
TCCGTCGCGC CGGGTTATGT GGCCATTTCG CCCGACAAGC GCAATCTCTA CGCGATTTCT
TCCGACAACA AGGTTTCTGC CTACGCCATC GAACCCGACC GCAAGCTCAC TTTCCTGAAC
AGCCAGCCTT CCGAAGGCGC CGGGCCCTGC CACGTGTCGG TACACCCGAC GGGCAAGATG
GCATTTGTCT CCAATTACGG AGGCGGCAGC TTTTCGGCCT ACAATATCGA GACCGGCGGG
AAGCTGAGCG CGGCCGTTTA CAAAGAGCAA TACACCGGAA CAGGCCCTCA CACCAAGCGC
CAGGAGAAAG CCCATGCGCA TTTTGCCACG GCCGGCCCGG ACGGGAAGTA TGTGTACGTG
ACCGATTTAG GAAGTGATAA AGTGATGAAT TACAGCGTCG ACGCCAATGC AGGAAAGCTG
ACGCCGAATG CCCCTCAGCC TTCATTTTCG GGGAAACCGG GAGCCGGTCC GCGCCATTTG
ATCATTCACC CGTCGGGCAA GCGCATGTTC CTGCTCAATG AGCTCGACGC AACAGTGACC
GCCTGCTCCA TCGACAAAAA GGGTGTGATT AAAGCAATTA AAACTTACCC GACGATCCCC
GCAGATTATT CCGGCCCAAC GAATACCAGT GCGGCCATTC ATCTTCATCC CAACGGCAAG
TTCGTGTACG TTTCGAACCG CGGGCACAAT TCCATCACCG CATTCCGGAT ACTGGGCAAT
GGCGAGCTGG AAATGGCGGA TCAGCAAACG AAATCCATCG CCACGCCGCG CGATTTCAAT
ATCGACCCTA CCGGGAAATA CCTGATCGTG GCCAACCAGG CATCGGATAA TCTCGTGGTG
TACGATGTAG ATGCAGAAAC GGGCAAATTT ACGTTCAAGC ATGAAAGCAT TGCCGTGAAG
TTGCCCATTT GTGTCGCATT CCTGTAA
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| Protein sequence | MMKRLILSIL LLSAGLSAFA QERKITFYVG TQDKGANSSI TRCELNLASG QITLIDTINK
SVAPGYVAIS PDKRNLYAIS SDNKVSAYAI EPDRKLTFLN SQPSEGAGPC HVSVHPTGKM
AFVSNYGGGS FSAYNIETGG KLSAAVYKEQ YTGTGPHTKR QEKAHAHFAT AGPDGKYVYV
TDLGSDKVMN YSVDANAGKL TPNAPQPSFS GKPGAGPRHL IIHPSGKRMF LLNELDATVT
ACSIDKKGVI KAIKTYPTIP ADYSGPTNTS AAIHLHPNGK FVYVSNRGHN SITAFRILGN
GELEMADQQT KSIATPRDFN IDPTGKYLIV ANQASDNLVV YDVDAETGKF TFKHESIAVK
LPICVAFL
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