Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3093 |
Symbol | |
ID | 8226667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3781078 |
End bp | 3782787 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644930924 |
Product | PA14 domain protein |
Protein accession | YP_003087473 |
Protein GI | 255036852 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCAA AAGTTTCCTG CACGCTGGCG GTGGTTTCGC TGATGCTGGC GGCATTTCAA ACCCTGCCGG AAAGCGACCT TCGGAAAAAG GCGCCTGTCG CCGAAATGAA CGCGGACGAA AGACCTGCGG GCATTGAACA CGTGATCGTG ATCGGTGTAG ATGGGCTGAG TCCCGACGGT ATCCGAAAGG CAGAAACGCC GAGTATCGAC CGGATGGTGG CCAATGGCGC TGTGAAATGG AATGTGCGGA CGGTGCTGAC CTCGGCGAGC AGCCAAAACT GGGCGTCGAT GATCATGGGC GCCGGCCCCG AGCAGCATGG CATTATCAAC AACGACTGGG AAATGGACGA CCACTCGCTG CCGCCCATTG CCCAGGAGGC CGACGGCCGC TTTCCGACCA TTTTCAGCAT TTTGCACAAG GCAAAACCCG ATGCGGAAAT CGGTGCAGTG TACCATTGGG GCGGTTTTGG GCGGTTGTTC CAAAAGAATG CGGTCAACTA CGACAAGCAT TTCTCGACAG AGGATTCAAC TGCGGCTGAT TTTGTCCAAT ACATTAAAAA TAAAAAGCCA ACACTCGGTT TCGTGCATTT CGACCACGTG GATCATGCAG GCCACCACGG CGGGCACGGC TCGCAGGAAT ACTACCAGTC GGTCACCAAA GCCGACTCGC TGATCGGGAA AGTGCTTGCC GGTATTCAAG ATGCCGGCAT CGCGGACAAA ACGCTGGTGA TTCTCTGGGC GGATCACGGC GGCATTGGTT ACGGGCACGG CGGCGCAACG CCGCAAGAGG CTGAAATAGC CGGCGTTTTG TTCGGGGCTG GTGTGAAAAA AGGCTACGAG ATTCAGCAAC AGGTTTATAC TTACGACCTT GCTTCGACGA TTGCGTTTGT GCTTGGTATC GAGCAGCCTT ATGCGTGGAT CGGTCGCCCG GTGAAGCCTG CATTTGCGGG GTTTGACGAA CCTAAAAATC TCTGGCTCGG CGAAAAAACG GTAAACGCGC CCGTGATCCA TCCCGAAAGA AAGCTGTATG AGCAGGCAGG AGGGCTTTTT GTGGACAAAC CGGCGACAGT GAGGATCGAT ACTAAAGCAG AAAAAGGTAC GACGCATTAT ACCATCGACG GTTCTGATCC CGGCCTGAAA TCGCCGGTTT ACACGCAGCC ATTCAATGTG AGCCAGACGA CCGTCGTCAA AGCGCGCACA TTTGATGAAA AAGGTAACCC GAGTTTGCTT TCCACTGCGT ATTTTAGGTT GGTCAAATCC GGGAAGGGCA ATGGAGTGAC CGCCATGTTT TTCAAAGCCA ATGATCTGAA CAAGCTTCCC GATTTTACCC AGCTTAAAAA CGGGAAGTCG TGGATCGCCC CGGAGTTTGG AATGGTGAAA AAAGACATTG AAGGCATGCT GGCAAAAGGA ACGGAAAGCT TTGCCATGCA ATTCGAAGGT TTTATTCAAA TCGACCGGGA AGGGAAATAT CAATTTTCAA CGCAATCAGA CGATGGAAGT AAGCTTTTTG TGGACGGAAA AGAAGTGGTG AACAACGACG GTAACCATGG TGTAGAGGAA AAAACAGGCT CCATTGACCT GAAAGCGGGC AGGTATCCGA TTAAAATTCA ATATTACAAT AACGGCGGCG GCTTTTGGCT CGACGCATTC TATCGCGGTC CGGGCGTTAC CAAGCAACTT ATCCCGGCCG ATAAGCTCTT TGTGAAATAA
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Protein sequence | MFAKVSCTLA VVSLMLAAFQ TLPESDLRKK APVAEMNADE RPAGIEHVIV IGVDGLSPDG IRKAETPSID RMVANGAVKW NVRTVLTSAS SQNWASMIMG AGPEQHGIIN NDWEMDDHSL PPIAQEADGR FPTIFSILHK AKPDAEIGAV YHWGGFGRLF QKNAVNYDKH FSTEDSTAAD FVQYIKNKKP TLGFVHFDHV DHAGHHGGHG SQEYYQSVTK ADSLIGKVLA GIQDAGIADK TLVILWADHG GIGYGHGGAT PQEAEIAGVL FGAGVKKGYE IQQQVYTYDL ASTIAFVLGI EQPYAWIGRP VKPAFAGFDE PKNLWLGEKT VNAPVIHPER KLYEQAGGLF VDKPATVRID TKAEKGTTHY TIDGSDPGLK SPVYTQPFNV SQTTVVKART FDEKGNPSLL STAYFRLVKS GKGNGVTAMF FKANDLNKLP DFTQLKNGKS WIAPEFGMVK KDIEGMLAKG TESFAMQFEG FIQIDREGKY QFSTQSDDGS KLFVDGKEVV NNDGNHGVEE KTGSIDLKAG RYPIKIQYYN NGGGFWLDAF YRGPGVTKQL IPADKLFVK
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