| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3040 |
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| Symbol | |
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| ID | 8226614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3716986 |
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| End bp | 3717729 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930871 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003087420 |
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| Protein GI | 255036799 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0850209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTT TCGAGAATCA GGTAGCTGTC ATCACGGGTG CAGCTTCGGG TTTGGGCCTT
GTGATCGCCC ATAAATTACT CCGCGACGGC GCGAATGTTG CACTGCTGGA CCTGAATGCA
GAAGCATTGA AAACTGAATT TACCGGCCAT GCCGAACGAC AAGAGCTCAT CGGCGTGGAT
GTGACGGACG AAAAGCTCGT CGCGGAAGCT GTTGTGCAGG CGGCGAAGCG TTTCGGGAAG
ATCGACATCC TCATTAACTG TGCGGGCATT ACGGGTGCCA CCAATCTCAA AAGCCATGAG
GTGGACACGG TCAATTTGCA AAAGGTATTC GATGTCAACT TCATGGCCAG TTTTTACACC
GCAAAAGCGG TGCTTCCCTA TATGCTGAGG AACAATTACG GTCGGATTCT GCACATTGCT
TCCATTGCCG GCAAGGAGGG CAACGCCGGT ATGCTGGCCT ACTCGGCATC GAAGGCGGCG
GTGATTGGTA TGACCAAAGT GCAGGGTAAG GAATATGCCG AAACGGGCAT CACCGTTAAT
GCATTGGCGC CGGCGGTGAT CCGGACCCCG CTGGTGGACG CGATGCCCGA AGCGCAGGTG
AAGTACATGA CCGATAAAAT ACCGATGAAA CGCTGCGGCA CGCTCGAAGA AGCCGCGAAC
ATGGCCGCAT TCATCGTGTC CCCGGAAAAC AGCTTCACCA CCGGCTTCGC ATTCGACCTT
TCAGGCGGCA GGGCTACTTA CTAG
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| Protein sequence | MNTFENQVAV ITGAASGLGL VIAHKLLRDG ANVALLDLNA EALKTEFTGH AERQELIGVD
VTDEKLVAEA VVQAAKRFGK IDILINCAGI TGATNLKSHE VDTVNLQKVF DVNFMASFYT
AKAVLPYMLR NNYGRILHIA SIAGKEGNAG MLAYSASKAA VIGMTKVQGK EYAETGITVN
ALAPAVIRTP LVDAMPEAQV KYMTDKIPMK RCGTLEEAAN MAAFIVSPEN SFTTGFAFDL
SGGRATY
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