| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3022 |
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| Symbol | |
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| ID | 8226596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3695729 |
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| End bp | 3698380 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644930853 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003087402 |
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| Protein GI | 255036781 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG0591] Na+/proline symporter
[COG3055] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03548] cyclically-permuted mutatrotase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.61129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.844759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTGCA ACATCCGACT ATTCCTAATC CTGACCTGCC TGCACCTGAT GTGGCCCGAT
AACGCATTGG CTAACGACAC GCTCACCAAC CGGATCGACT GGTCGGCGGC GGCCAGCCTT
CCCGCCGCGG CAGGGGAAGA CGCAAACCCC GGTGTGGCCG GTGCGTTTGC AGGCTGGCAT
AACAGTGCCC TGCTCATTGC CGGCGGGGCC AATTTTCCTG CCGGTATGCC CTGGGAAGGT
GGCCGCAAAG CCTACCACGA CCGCATTTAC GTAATGAAAA AAAGCGGCGC GTCCTATCGT
TGGATCGACG TGCGCAATCC GCATTTGAAA CAAAAAACCG CTTACGGGGC CAGTGTATCG
GTCCCAGGCG GCGTGGTGTG CATCGGCGGA GAAAGCGAAG CGGGTGCCAG CCGGAATGCA
TTCCTCATGC AATGGGACGA CGCTGGTAAG CAGGTAGTTT TTAAGCCATT ACCCGACCTG
CCCGTACCGC TCGCCAATGC AGCCGCGACG AGCATTGGTA ACGTGGTGTA CATCGCGGGC
GGGGAAAGCA GTGGTAAGCC TTCGAATGGC TTTTTCGCAT TAGACTTGTC CGAGGCTGAC
CCGCAATGGC AGACGCTGCC TGCGCTGCCG GTCGCATTGT CGCACGCGGT GGCCGTGGCG
CAGAGCGATG GCAAGGCTTC CTGCGTGTAT GTGCTGGGTG GGCGCAGCGC CAGCGCGTCG
GGCGTGAGTG CCTTGCACGG GACCAATTTC CGCTATGATC CTGCCAAACG ACAATGGCAG
CAGCGCGCGG GGATCAGCGA CGGAACGGCA CCGACCACGC TTTCGGCTGG AACGGGCCTC
GCCAGCGGTG CTTCCTATAT TGTGTTGTTC GGAGGGGATA ATGGGAAGGT GTTTAATCGG
ATTGAAACCT ATAATGCCCG CATAGCCGCC GCAACCAACG ACGCAGAGAA GCAAAGGCTC
CAAGCCGAAA AACTGCCGCT GCTGCAACAG CACGTCGGTT TTAGCAGAAA TATTTATTTG
TACAACACCA TTACCGACGC CTGGACCGTC ACCGGCGAGC TGCCGGAAGC CGCGCAGGTG
ACGACCACCG CCGTGAAAGC CGGCGACGAG ATTTTCATCC CGAGCGGGGA GGTGCGGCCC
GGCGTGCGTA CGCCCGTGGT CATGCGCGGG AGCGTGCGGA GCCAATCATC GTTCTCCTGG
ATTGATTCGG CGGTGCTATT CATTTGTTTC CTGCTGATGA CGGCCGGGCG GTTCCTGTTT
ACGGGTAAAA CCAGCAACAC CGACGACTAT TTCAAAGGCG GCGAGCGTAT TCCGCAATGG
GCGGCGGGGA TCAGCATTTT CGGGGCCAAA CTGAGCGCGA TCACCTTCAT GGGCATTCCG
GCCAAGACAT ACGCCACGGA CTGGACGTAC TTTTTCCTGC TGATGACGAT TATCATGGTG
ATGCCGCTCG TGGCGGGCTA TTTCATCCCG TTTTACCGGC GGCTGAACGT CACGTCGGCA
TATGAATACC TGGGCAAGCG CTTCAACACC GGCTCGCGGA TGCTGGCTTC GGCATTGTAC
GTGTTGCTGC AACTAGGGCG AATGGGCATT GTGGTGCTCC TGCCGAGCAT CGCGCTTACG
CTCGTGACGG GCATTGATAT CAACATCTGC ATCATCATGA TCGGCGTGAT CAGCATATTC
TTCACAGTGA AGGGCGGTAT CGAGGCGGTG ATATGGGTGG AGGTGATCCA GGTACTGATC
CTAGCAGCGG GCGCATTGTT CTGCCTGTTT TACCTGCCGT TTCAAATCGG CAACTGGAAT
GCGGCCGCCG ACGTGCTGCA AAATGCCGAA AAGCTGAAAG TATTCGACTT CCGCTTCGAT
TTCACGGAAC CGACTTTCTG GGTGGTGGTG ATCGGCGGGC TGGCGATCAA CCTGCTCACC
TACGGCACCG ACCAAACCAC CGTGCAGCGC TACCTGACGA CCAAATCGGA GAGCGAGTCC
GTGAGGAGCC TCAAACTGGG CGCCTGGCTC ACGTTACCTT CCACGCTGGT ATTCTTTTCA
ATCGGCACGC TGCTGTTTTT GTTCTTTCGC GAACAGCCGG CGTCGGTAAA CATGGCGCTG
GACAATGTCG ATAATATTTT TCCATGGTAC ATTGTGAGCC AGCTACCGGC CGGGCTTTCG
GGCCTGCTTA TCGCCGGTAT TTTCGCCGCC GCCATGAGTA GCACCGAGGC CAGCATGAAC
TCCACCGCCA CCTTGCTCAC CACCGATTTT TACCAAAAAC TATACCCCGG CGTGACGCCG
AAGCAGACCC TGTTCTTCGC CCGCGCGGCC ACGCTGCTGC TCGGGATATT TGTCACCTGC
ATCGCATTAT ACATGGCGCA CAAGGGCGTG TCGTCGCTGT GGGATCGATT CAATACGATT
TTGGGCCTGT TCACAGGCTG CATTGGCGGG GCATTTGTGC TCGGGATATT CACAACCAAA
GCCAGCGGCA ACGGCGTTAT GGCCGGTATG GCGCTCAGCT GTGTCACCCA GCTGCTCATC
CAGCAGTATA CCGACATCCA TTTGCTGATG TACGCATTCA CCGGGCTGGT AAGCTGTGTT
GGATTTGGCT ATGTTTTAAG TTTGCTGATG CCCGCAAAGC GAGACCTGGC GGGTTTAACG
ATCTACGAAT GA
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| Protein sequence | MLCNIRLFLI LTCLHLMWPD NALANDTLTN RIDWSAAASL PAAAGEDANP GVAGAFAGWH
NSALLIAGGA NFPAGMPWEG GRKAYHDRIY VMKKSGASYR WIDVRNPHLK QKTAYGASVS
VPGGVVCIGG ESEAGASRNA FLMQWDDAGK QVVFKPLPDL PVPLANAAAT SIGNVVYIAG
GESSGKPSNG FFALDLSEAD PQWQTLPALP VALSHAVAVA QSDGKASCVY VLGGRSASAS
GVSALHGTNF RYDPAKRQWQ QRAGISDGTA PTTLSAGTGL ASGASYIVLF GGDNGKVFNR
IETYNARIAA ATNDAEKQRL QAEKLPLLQQ HVGFSRNIYL YNTITDAWTV TGELPEAAQV
TTTAVKAGDE IFIPSGEVRP GVRTPVVMRG SVRSQSSFSW IDSAVLFICF LLMTAGRFLF
TGKTSNTDDY FKGGERIPQW AAGISIFGAK LSAITFMGIP AKTYATDWTY FFLLMTIIMV
MPLVAGYFIP FYRRLNVTSA YEYLGKRFNT GSRMLASALY VLLQLGRMGI VVLLPSIALT
LVTGIDINIC IIMIGVISIF FTVKGGIEAV IWVEVIQVLI LAAGALFCLF YLPFQIGNWN
AAADVLQNAE KLKVFDFRFD FTEPTFWVVV IGGLAINLLT YGTDQTTVQR YLTTKSESES
VRSLKLGAWL TLPSTLVFFS IGTLLFLFFR EQPASVNMAL DNVDNIFPWY IVSQLPAGLS
GLLIAGIFAA AMSSTEASMN STATLLTTDF YQKLYPGVTP KQTLFFARAA TLLLGIFVTC
IALYMAHKGV SSLWDRFNTI LGLFTGCIGG AFVLGIFTTK ASGNGVMAGM ALSCVTQLLI
QQYTDIHLLM YAFTGLVSCV GFGYVLSLLM PAKRDLAGLT IYE
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