Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2940 |
Symbol | |
ID | 8226513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3604077 |
End bp | 3604730 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644930770 |
Product | NLP/P60 protein |
Protein accession | YP_003087320 |
Protein GI | 255036699 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.284799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGT ACCTTTCCCG CCCCCTTTCC TGCACCATTT TCACCCTCCT GATCACCACA TTGCTATTTT CCTGCGACAC GCTCCGCAAA ACGCCGGAGC GCAACTCGTC CTATCGCAGT TCACGCGGGC CCGCCTCGCG GAGCACCGCC TCGCGCGGAC GCACCTCACC CGCCCGCAAG CCGGTAGCCA AAGCGCCGGT CAGAAAGCCA GCCCCCACCC GCACCGCCAC CACTTACTCG CGCCCCGGCG ACGCCAATAC TGCCAATGTA CCCGAAGTAG TGCAAATAGC CCGCACGTAT ACCGGCACGC CCTATCGCTC GGGCGGTAAC GACAAGCAGG GCATCGACTG CTCCGGCCTC ATTTGCCAGG TGTATTCCGA AATGGGCGTA AAAGTGCCCC GCATTTCATG GCAGCAGTCC GAGTTTGGGC AGGAAGTGGG CAGCGTGGCC GAAATCAAGC CCGGCGACTG GCTGTTTTTC GTGCCCGAAG CCGGAAAGGA AGGCTACGTA TCGCACGCCG GCATTGTAAC CGACGTGCGC AGCCGCGACG AGATCATATT CATCCACGCC TCCACGTCCC GCGGCGTGCG TGAAGACAAT CTGTTTTCTA CCTATTTTAA AGGCCGGTTC GTGAAAGCCA TGCGGCCGTT CTGA
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Protein sequence | MKKYLSRPLS CTIFTLLITT LLFSCDTLRK TPERNSSYRS SRGPASRSTA SRGRTSPARK PVAKAPVRKP APTRTATTYS RPGDANTANV PEVVQIARTY TGTPYRSGGN DKQGIDCSGL ICQVYSEMGV KVPRISWQQS EFGQEVGSVA EIKPGDWLFF VPEAGKEGYV SHAGIVTDVR SRDEIIFIHA STSRGVREDN LFSTYFKGRF VKAMRPF
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