| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2935 |
|---|
| Symbol | |
|---|
| ID | 8226508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3598845 |
|---|
| End bp | 3599798 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644930765 |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_003087315 |
|---|
| Protein GI | 255036694 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3958] Transketolase, C-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ACACCTTCAC TGAGAAGAAA GATACGCGTT CGGGCTTCGG TGCCGGAATG
CACGTGCTGG GGCAGCAAAA TCCCAACGTT GTGGCGCTTT GTGCCGACCT CGTGGGTTCT
TTGAAACTCG AACCGTTCAT CAAAGAAAAC CCTGAGCGCT TTATCCAATG CGGTATTTCC
GAAGCGAATA TGATCGGTGT TTCGGCCGGT TTGACCATCG GAGGCAAAAT TCCTTTCGCA
ACAACTTTCG CGAACTTTGC GACCGGCCGT GTGTACGACC AGATCCGTCA GAGCGTAGCA
TATTCAGGCA AAAATGTGAA AATCTGTGCT TCACACGCAG GTTTGACTTT GGGTGAAGAT
GGTGCTACAC ACCAGATCCT CGAAGATATC GGGATGATGA AAATGCTTCC GGGCATGACG
GTTATCAACC CTTGCGACTA CAACCAGACC AAAGCGGCTA CCATCGCATT GGCAGAACAT
GAAGGCCCTG CTTACCTGCG TTTTGGCCGT CCGGTAATCC CTGTTTTCAC TGATCCGGAC
CAGAAGTTCG AAATCGGTAA GGCGTGGACT GTGAACGAAG GTACTGACGT GAGCATCTTC
GCAACCGGCC ACATGGTATG GGAAGCGATC CAGGCTGGCG AAATCCTTGA AGCAGAGGGT
ATCAATGCAG AGATCATCAA TATCCACACC ATTAAGCCGC TGGACGAAGA GGCGATCCTG
AAATCGGTGG AGAAAACAGG CTGCGTAGTA ACAGCTGAGG AGCACAACCG CATCGGTGGT
TTGGGTGACA GCGTGGCGCA GGTTTTGGTT AAAAACAAAC TTGTTCCGCA GGAATATGTA
GCTGTAAACG ACAGCTTCGG TGAAAGCGGA ACGCCGGCAC AATTGCTGGA AAAATACGGC
CTCGATGCAA AACACATTGT AGAAGCGGCA AAACGCGCGA TAGCAAGAAA GTAA
|
|---|
| Protein sequence | MKKYTFTEKK DTRSGFGAGM HVLGQQNPNV VALCADLVGS LKLEPFIKEN PERFIQCGIS
EANMIGVSAG LTIGGKIPFA TTFANFATGR VYDQIRQSVA YSGKNVKICA SHAGLTLGED
GATHQILEDI GMMKMLPGMT VINPCDYNQT KAATIALAEH EGPAYLRFGR PVIPVFTDPD
QKFEIGKAWT VNEGTDVSIF ATGHMVWEAI QAGEILEAEG INAEIINIHT IKPLDEEAIL
KSVEKTGCVV TAEEHNRIGG LGDSVAQVLV KNKLVPQEYV AVNDSFGESG TPAQLLEKYG
LDAKHIVEAA KRAIARK
|
|---|
| |