Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2883 |
Symbol | |
ID | 8226456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3549082 |
End bp | 3549951 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930713 |
Product | UbiA prenyltransferase |
Protein accession | YP_003087263 |
Protein GI | 255036642 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0088223 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGCAC TCAAACCTTA TTTGCAGCTC ACCCGCCCGG CCAACCTGGT AACCGCCATC GCGGACATCC TGGCCGGTAT GGCGATCGCG CAGTTTACAT TTTCGGATTT TTCACCGGCA TTGCTCGTGC TTTCCACGCT CGGCCTGTAT GGCGGCGGGG TAGTGATGAA TGATGTTTTT GATGCCAAAC TGGATTCAGT AGAGCGACCG GAGCGGCCTA TTCCAAGCGG TAAGGTGCCT CTGGCGCAGG CTGCTGCAAT GGGCATTTCG CTGTTGCTGC TGGGCATTAT CGCGGCAGCG GCCTACAACC TGCAAAGCGG CATGATCGCT GTGGTGGTAG CGATGCTCAC CATTTTGTAT AATCGATTTG CCAAACACCA CGTGTTCTTC GGTCCGCTCG TGATGGGCAT GTGCCGGGGC GGTAACCTTA TCCTCGGCAT GAGCGTACTA CCCGAATCGT TGCAGCAATG GGCGTTCATC GCCATTTTCC CGATCATGTA CATTGGCGCC ATTACGCTCA TCAGCCAGGA CGAGGTGCAT GGCGGCAAGA GGCGTACATT ATATATAGCC GCATTTCTCT ACCTGGCTGT GCTTGCGGCG CAGCTCATCA TTGCGCATGG AAAGGGTAAT TTGCTGTTTA CTATTCCGTT TATCCTGCTG CACGCCTGGT TTATTTTCCG GCCGCTTTGG AATGCGATGC AGAATCCCAT CGGCCCGCTT ATCGGTAAGG CGGTGAAAGC CGGGGTAATC TCGCTGATCG TCATGAATGC TTCCTGGTGT GCAACATTTG GGCTGCTGCC TATTGCCATT GCAGTGCTCG CATTGCTGCC GCTTTCAATG TATTTAGCGA AGGCATTTGC GGTTACTTAA
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Protein sequence | MAALKPYLQL TRPANLVTAI ADILAGMAIA QFTFSDFSPA LLVLSTLGLY GGGVVMNDVF DAKLDSVERP ERPIPSGKVP LAQAAAMGIS LLLLGIIAAA AYNLQSGMIA VVVAMLTILY NRFAKHHVFF GPLVMGMCRG GNLILGMSVL PESLQQWAFI AIFPIMYIGA ITLISQDEVH GGKRRTLYIA AFLYLAVLAA QLIIAHGKGN LLFTIPFILL HAWFIFRPLW NAMQNPIGPL IGKAVKAGVI SLIVMNASWC ATFGLLPIAI AVLALLPLSM YLAKAFAVT
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